| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BT9727_0090 |
|---|
| Symbol | spo0H |
|---|
| ID | 2857976 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_005957 |
|---|
| Strand | + |
|---|
| Start bp | 108718 |
|---|
| End bp | 109374 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 637511460 |
|---|
| Product | RNA polymerase factor sigma-70 |
|---|
| Protein accession | YP_034446 |
|---|
| Protein GI | 49476711 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02859] RNA polymerase sigma-H factor
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 8.822440000000001e-19 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAAGCAG GCTTCGTAAG TGTAGGCGAC GTTACATTTC GTGATTTAGA AGATGAGGCA
ATCGTTGAGT TAGTTCGAAA AGGTAATACT GACGCTCTAG AATATTTGAT TCACAAATAT
AAGAACTTTG TTCGCGCGAA ATCGAGATCT TATTTCTTAG TGGGTGCCGA TCGAGAAGAT
ATTGTTCAAG AAGGTATGAT TGGATTGTTT AAAGCGATTC GTGATTATAA AGAGGACAAG
CTGTCTTCAT TCAAAGCATT TGCTGAACTG TGTATCACTC GACAAATTAT TACCGCTATT
AAAACAGCAA CCAGGCAAAA GCATATTCCG TTAAATTCGT ATGTGTCTTT AGATAAACCG
ATTTATGACG AGGAATCTGA TCGGACATTA TTAGATGTTA TTTCGGAAGC GAAGGTAACT
GATCCTGAAG AAATGATTAT AAGTCAGGAA GAATATACCG ACATAGAATC TAAGATATCT
GAATTATTAA GCGATTTAGA AAGGAAAGTG CTTTCTTTAT ATCTAGACGG TCGTTCTTAT
CAAGAGATTT CGGAACAGTT AAATAGACAT GTAAAATCTA TTGATAACGC TTTACAGAGA
GTGAAGCGGA AATTGGAACG ATATATGGAA ATGAGAGAGA GTACCACTTC AAATTAA
|
|---|
| Protein sequence | MEAGFVSVGD VTFRDLEDEA IVELVRKGNT DALEYLIHKY KNFVRAKSRS YFLVGADRED
IVQEGMIGLF KAIRDYKEDK LSSFKAFAEL CITRQIITAI KTATRQKHIP LNSYVSLDKP
IYDEESDRTL LDVISEAKVT DPEEMIISQE EYTDIESKIS ELLSDLERKV LSLYLDGRSY
QEISEQLNRH VKSIDNALQR VKRKLERYME MRESTTSN
|
|---|
| |