Gene PSPTOA0071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTOA0071 
Symbol 
ID1187361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004633 
Strand
Start bp72879 
End bp73307 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content58% 
IMG OID637408404 
ProductGntR family transcriptional regulator 
Protein accessionNP_808729 
Protein GI29171545 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones66 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAACC ACAGAACGCA AAAAATGCAC GCTCAGCAGG TGCTTGAACA CCTGGCCTAC 
GGCTTGGCAC AGCCAATAGC GCTGCCCCGC GAGACCATTG AAGAAGTGCT TCGCGAAGCC
ATCATGGATG GACGACTTGA ACCGGGTGAA CGGCTTACGC AGCAAGCCAT TGCCAATGCC
TTCCAGGTCA GCCGGATGCC GGTGCGCGAA GCCCTGCGGT CATTGGAGAC GCAGGGTTAC
ATCGCGACGG AGTATCACAA AAGTTATCGG GTCACGAACG GCCATGACCT GCCCCAGTGC
GGCCACCTGC CTGGCTTGCT GAGGTGCGTT GCAGAACGCC ATACGCAGCT GGGCGACCTC
GAATCAAAAG TGGCCTTTGA AAATGAAATC CTGCACGTCC TGGGCCGGCT GCGCCCTACC
CCTTGCTGA
 
Protein sequence
MINHRTQKMH AQQVLEHLAY GLAQPIALPR ETIEEVLREA IMDGRLEPGE RLTQQAIANA 
FQVSRMPVRE ALRSLETQGY IATEYHKSYR VTNGHDLPQC GHLPGLLRCV AERHTQLGDL
ESKVAFENEI LHVLGRLRPT PC