Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTOA0071 |
Symbol | |
ID | 1187361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004633 |
Strand | + |
Start bp | 72879 |
End bp | 73307 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637408404 |
Product | GntR family transcriptional regulator |
Protein accession | NP_808729 |
Protein GI | 29171545 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 66 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAACC ACAGAACGCA AAAAATGCAC GCTCAGCAGG TGCTTGAACA CCTGGCCTAC GGCTTGGCAC AGCCAATAGC GCTGCCCCGC GAGACCATTG AAGAAGTGCT TCGCGAAGCC ATCATGGATG GACGACTTGA ACCGGGTGAA CGGCTTACGC AGCAAGCCAT TGCCAATGCC TTCCAGGTCA GCCGGATGCC GGTGCGCGAA GCCCTGCGGT CATTGGAGAC GCAGGGTTAC ATCGCGACGG AGTATCACAA AAGTTATCGG GTCACGAACG GCCATGACCT GCCCCAGTGC GGCCACCTGC CTGGCTTGCT GAGGTGCGTT GCAGAACGCC ATACGCAGCT GGGCGACCTC GAATCAAAAG TGGCCTTTGA AAATGAAATC CTGCACGTCC TGGGCCGGCT GCGCCCTACC CCTTGCTGA
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Protein sequence | MINHRTQKMH AQQVLEHLAY GLAQPIALPR ETIEEVLREA IMDGRLEPGE RLTQQAIANA FQVSRMPVRE ALRSLETQGY IATEYHKSYR VTNGHDLPQC GHLPGLLRCV AERHTQLGDL ESKVAFENEI LHVLGRLRPT PC
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