Gene PSPTOA0055 details

Gene Information

• Locus tag: PSPTOA0055
• Symbol: traQ-2
• ID: 1187345
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004633
• Strand: +
• Start bp: 56258
• End bp: 56800
• Gene Length: 543 bp
• Protein Length: 180 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 637408388
• Product: traQ protein
• Protein accession: NP_808713
• Protein GI: 29171529

Plasmid Coverage information

• Num covering plasmid clones: 58
• Plasmid unclonability p-value: 0.872055
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACGGCA GTACTGACGC GATTCAAATG TTGGTCAATC TGTCCCACAA CCTGCTGACT 
TCCTTAGTCA ACTTTGCCTT CACGCTGGGC AGCTTGTTTG CGGTCACTGG CGCTGTGAGC 
TACCTCGCCA CTCACGCCAG TGCCGCGCGC AAAGCACCTG GCCATGCGGA AGGTGGCGGC 
AAGGTCATCG CTGTGTTGTT GCTCTGTGGA GGCCTGGCCG GCCTCGATCA AATGATCGGT 
GCTGCCGCTC GCCAGTTGGG TTGGCAGGGC GCGACCTTCG ATGCCATCAG CTACGTGGAC 
GTGGGCACCT TTGGTGTCGC AGCCGATGCG GCCAATGCCG TGTTAAGTCT GGTGCGCATG 
CTGGGCGTCT GGTTCGCGCT GCAAGGCATG TTGTCCTGGA AACGCTCGTT CAAGGACGGT 
CATACGGGCC TATCGGCCAG TCAGGACGTT TCAAGCGGTA CCCTCAAGTT TGTCCTGGGC 
GTTTTCTGCG TATGCAATCC GTACCTGCTT AGCGCCCTGC AAAAAACCCT CGGCCTGCTG 
TAA 

 

Protein sequence

MDGSTDAIQM LVNLSHNLLT SLVNFAFTLG SLFAVTGAVS YLATHASAAR KAPGHAEGGG 
KVIAVLLLCG GLAGLDQMIG AAARQLGWQG ATFDAISYVD VGTFGVAADA ANAVLSLVRM 
LGVWFALQGM LSWKRSFKDG HTGLSASQDV SSGTLKFVLG VFCVCNPYLL SALQKTLGLL