Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTOA0054 |
Symbol | traP-2 |
ID | 1187344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004633 |
Strand | + |
Start bp | 55584 |
End bp | 56249 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637408387 |
Product | traP protein |
Protein accession | NP_808712 |
Protein GI | 29171528 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 58 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGGCTC CCACCCAGGC TCCCAGTCGT AGCGTGTGGC AACGCCCGAT CGTCATGGGG CTTTCACTTC CCTGGCTGAT CGGCATTGCC CTGGTATTGG CACTGGCTGG CTGGTACTTG TTTGGCCCCG AGAAAACCGC GTCAGTCAAT CGTCTGGCCT TTGAAAATGA CTTCGAACAG CAACCTTTGC CCGCTGAACA GTCGAGTACC CCCCCTGTTG CAGCCGCTGC CGAGTCTGAT TTGGGCCAGT TCAAGAACGA GGTTGCGGCC ATGATCGGCG GGGTGCGTAC CTACGCAGAG GTGAATCGCA CCGCGATCCA GCGCTTGTCC GAAACGATCA AGACTCAGGG GGTTGCACAA CAGGCGTTGC AACAGCAACT GGCCGAGGCA CAAGCGCAAA ACAGCGTCTT GTCAGCACGT CTGTCCTTCC TTGAAGGACG ACCCGGCGCG ACGACCACGA CACAGCAGGC CAGCAAGCCA GTCGCTAAAA CACGTTCGCC GTTGAATGGT ATGCGCGTGC AAGCCATTCA GAACGGCATG GCCTGGGTGT ACTGGCAGGA CAAGACCTGG GCCGTCAGTC CCGGCGAGAA ACTGGGCCAG GTGACTGTCA CCGGCATCAA TCCCCAGGCC CGCGAAGTGC TGACCAGCGC GGGCACAATC AAATGA
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Protein sequence | MPAPTQAPSR SVWQRPIVMG LSLPWLIGIA LVLALAGWYL FGPEKTASVN RLAFENDFEQ QPLPAEQSST PPVAAAAESD LGQFKNEVAA MIGGVRTYAE VNRTAIQRLS ETIKTQGVAQ QALQQQLAEA QAQNSVLSAR LSFLEGRPGA TTTTQQASKP VAKTRSPLNG MRVQAIQNGM AWVYWQDKTW AVSPGEKLGQ VTVTGINPQA REVLTSAGTI K
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