| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTOA0053 |
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| Symbol | traO-2 |
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| ID | 1187343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004633 |
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| Strand | + |
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| Start bp | 54184 |
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| End bp | 55542 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637408386 |
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| Product | traO protein |
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| Protein accession | NP_808711 |
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| Protein GI | 29171527 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 53 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAACG AAAACGATGC CAAACGCGAC ATGAAACTCA CCGCAGCGCT GGTTGGAGGC
GCATTGGTGG TCGTTTTTGG CGGTGCCTAT TACCTTTGGG ACTGGCTGGC CAGGCCTGAG
CCGGCGCAAT CGAAGGTAGA CCTGGGTCGA GTAGCACAAG CTTCGCGCAG CCACAGCACT
GAAAGCCCTG CCTATCGCGA TCTGCTCAAG CAATACAACG AGGAAGGGGC CAGCACGGCT
AAAAACGAAA ACAGCAGCTT CATTGCCAGT ATGCCCATGG AGCAGACGAG CGTGATGCTG
CCTGTGACGA AGGCCAAGCC TGCCCCTCAG GCAGAGCCTA CCGCCCGGCG TAGCCATACT
CGTCAGGACG AGAACTCAAA AGACTCCGAA AAGAAGGAAG ACCCGCGTCT GAAGGCATTG
CTAGAACGGA TCAATCCTGA AAAAAAAGCC GAAGAGCGGC AGTCCGGACT GGTCTTCGCC
CATGTTTTAG GGGGAACTAA CGCTTTGAAT GGCTCAGGCG ATACGAACAC GGGTTCTGCT
GGAGGCTATG ACAGCTGGAG TGAAACCCTG CCGGGAGGTG CCAAGCTGAA AACCGCTTCC
ATGAAAAGCA CCGCAGAACC CTATTCACCT GTCGAAGTGG TGCCGCCCTA CTGGCGCGGG
GCTGGCGTGA TCGATATCGG TGTGGACTCG GACAACAGCA CCACGCCGGT GCTGGGCAAG
CTGTCCGGGC CTTATGCCGG GGCTGTGCTC AAGGCACCCG AGGGCGCCAG GTTGGCCGGT
GATGGTGTGG TGATCCACTT CACTGAAATG GCCTTCAATG GCGTCAATTA CAAAGTCGAT
GCCTATGCGC TTCAGGACGA CACCCTGTTG GCCAACGTGG CTTCTGAAGT GAACCACCGC
TACATGTCAC GCATTGTGTT GCCAGCGGTA CTGGGCGGCA TTGGCAATAT CAGCGATATG
TATTCGCAGG CCAATACTCA GGTCCTCAGC AATGGCTTTT CCACCCAGAC CGCCCGACCG
GGCATGCCGG ATGGTACCGC CGTCGCCGGC ACCATTCTGG GCGGTGCCGC CGGTCAGGCG
GCCAAAGTGC TGACTGAAGA CGCCGCCCGC ACCCCGGCTA CCCAAGTCAA TGTGTTCAAG
GGGCAGGTGG TCGCGATTCA GTTCATGCGA GGCGTATACG CAGGTGATGC CGTTGCCCCA
GGGCGAAGCG GTGAAACGGT GCAACCTGCG GCTCCCGCTC AGGCCGTCAT GTCGGCACAA
CCCCAGTCCC CAGCCCAACC GCTGACGCCT GATCAATGGC GTGCGCAGAC CCAGACGCGA
ATCCAGGCGC AGCGCAAGCT GCAGGAGAGT CAACAATGA
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| Protein sequence | MANENDAKRD MKLTAALVGG ALVVVFGGAY YLWDWLARPE PAQSKVDLGR VAQASRSHST
ESPAYRDLLK QYNEEGASTA KNENSSFIAS MPMEQTSVML PVTKAKPAPQ AEPTARRSHT
RQDENSKDSE KKEDPRLKAL LERINPEKKA EERQSGLVFA HVLGGTNALN GSGDTNTGSA
GGYDSWSETL PGGAKLKTAS MKSTAEPYSP VEVVPPYWRG AGVIDIGVDS DNSTTPVLGK
LSGPYAGAVL KAPEGARLAG DGVVIHFTEM AFNGVNYKVD AYALQDDTLL ANVASEVNHR
YMSRIVLPAV LGGIGNISDM YSQANTQVLS NGFSTQTARP GMPDGTAVAG TILGGAAGQA
AKVLTEDAAR TPATQVNVFK GQVVAIQFMR GVYAGDAVAP GRSGETVQPA APAQAVMSAQ
PQSPAQPLTP DQWRAQTQTR IQAQRKLQES QQ
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