Gene PSPTOA0040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTOA0040 
Symbol 
ID1187330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004633 
Strand+ 
Start bp41631 
End bp42164 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content55% 
IMG OID637408373 
Producthypothetical protein 
Protein accessionNP_808698 
Protein GI29171514 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones64 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATT GGCGTGTTTT GATGCACAAT TCTTCCGTTT ATCAGTCGCT TATCACGTCG 
ATCGAACGAT TGGATGTGGA GGTGTATTCC CCCGAAAGCA TTACCTACCG CAAACGTCCT 
GATCGCCCTT CATCGACAGA GAAGGTGGTG CGTTTGTTTC CTGGCTATCT GCTGCTGCGC 
TTCGATCCCC AAGTGACGCA CACCACCACC ATCACAGCGT TGAACGGCGC CCGTGGGTTT 
GTTCAGTTTG GCGGTCAAAC GTGTGAGTTC GGCGGTCAAG CGTGTGTCAT GCAGGACAGC 
ACAGTAGAGG GCTTGAAGGC AGCGGCTTTG GTTCGTTCCA ACCGTGCGCT TGATTGCGTC 
GAGTTTCGTA ATTTGCCGAC AGAGCTGGAA AAAACGCTGC GTCTGATCAT CGACATGAAA 
TCTGAAGCTG CGCGTAGAGC GGCTTTCCTT GCGCTCCTGG CCCAGGACGC AGCGCTGGAG 
CGCCTTGTCA GGCGCCACGG AACCCTTTGC TATTCGAGGG TACGTGCCGC CTAG
 
Protein sequence
MKNWRVLMHN SSVYQSLITS IERLDVEVYS PESITYRKRP DRPSSTEKVV RLFPGYLLLR 
FDPQVTHTTT ITALNGARGF VQFGGQTCEF GGQACVMQDS TVEGLKAAAL VRSNRALDCV 
EFRNLPTELE KTLRLIIDMK SEAARRAAFL ALLAQDAALE RLVRRHGTLC YSRVRAA