Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTOA0025 |
Symbol | |
ID | 1187374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004633 |
Strand | + |
Start bp | 25520 |
End bp | 26356 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637408358 |
Product | hypothetical protein |
Protein accession | NP_808683 |
Protein GI | 29171499 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.0000725071 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTATGT CCAGCAACTT CCGTAACCCA TGCATGATCC GCAGTGACGT CCCACTGAGC AACGATCAGA TCGCCCACTA TGTGCCTTCC ATCTTTGCCG AAGAAGCGCA CGACAGCAGG TCGGCACGTT ATCTGTATAT CCCGACCGTG CAGGTACTTG ATGCGCTGCG CGCCGAAGGA TTTGAACCAT TCATGGCCTG TCAGACACGC GTGCGTGACC AGGGCAAACG TGAGCACACC AAGCACATGC TGCGCTTGCG CCATGCGAGC CAGATCCTGG ACCAGGAAGC CAACGAAATC ATCCTTCTCA ACAGCCACGA TGGCAGCAGC AGCTATCAAA TGATTGGAGG CAAATTCCGT TTCGTGTGTG CAAACGGACT GGTACTGGGG GACGTTGCCG CTGACCAGAA AGTGCGCCAT AGCGGCCGTG GTGATGTGGT AAATGACGTG ATCGAAGGCG CCTTCGAAGT GTTGAAGCAT TTCGAACAGA TCGACCACAT AACCGCCGAC ATGAAGCATC AACAATTAGA CCAGGACGAG CAAGAGGCCT TTGCATTGGC TGCCTTGGCG TATCGCTACG ATCCGGCAGA AGGACCTGCG CCTGTTACCC CGTCCCAGTT GCTCATGCCC CGCCGTCGTG AGGACCGCAG CAGCGACCTT TGGACCACGT TCAATCGAGT CCAGGAAAAC ACCATAAAAG GCGGTTTGAC CGGGCGCAAC AAGCAAGGCC GACGCACGAC AACGAGGGCA GTTAATGGCA TTGATCAGGA TGTGAAATTG AATCGCGCAC TGTGGGTGCT CGCACAGGCT CTGCAAGGCC GTCAGCTCGC CGCCTAA
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Protein sequence | MRMSSNFRNP CMIRSDVPLS NDQIAHYVPS IFAEEAHDSR SARYLYIPTV QVLDALRAEG FEPFMACQTR VRDQGKREHT KHMLRLRHAS QILDQEANEI ILLNSHDGSS SYQMIGGKFR FVCANGLVLG DVAADQKVRH SGRGDVVNDV IEGAFEVLKH FEQIDHITAD MKHQQLDQDE QEAFALAALA YRYDPAEGPA PVTPSQLLMP RRREDRSSDL WTTFNRVQEN TIKGGLTGRN KQGRRTTTRA VNGIDQDVKL NRALWVLAQA LQGRQLAA
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