Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTOA0024 |
Symbol | |
ID | 1187373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004633 |
Strand | + |
Start bp | 25096 |
End bp | 25473 |
Gene Length | 378 bp |
Protein Length | 125 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637408357 |
Product | hypothetical protein |
Protein accession | NP_808682 |
Protein GI | 29171498 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 0.00016445 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAGAC AAGCAAAGCA ACAGCTGATG AAGCGCTTCA CAAGCGGTCA GGTCGAGATC TGCAAAAAGC TGCTGAAACT GAGTCGCCAG GTACACAAGT TCAATGCCCG CGTCGAGTTC CTGGTGCTGA CGTTCAAGCA TGACCTGGCA GACGCCGTAG TCCGGTATGA ACTTTGGGAC AACGGTTTCG AAGGCCTGGG CGAACGCCAG TTCGACAACT GCTTTGAAAT GGGTGACTCG GCCGAGGTGA TCGCCGAACT AATCACCACA GCGCGTCGTG AAGGCTTCGT GGAAAAAATT CAGACCTGGT GCGGCAACGA ATCGTTTGCC CGCTGGTGCA GCTACGCCGA CCGCCAGGGC GACCTTTTCG CCGCTTAA
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Protein sequence | MNRQAKQQLM KRFTSGQVEI CKKLLKLSRQ VHKFNARVEF LVLTFKHDLA DAVVRYELWD NGFEGLGERQ FDNCFEMGDS AEVIAELITT ARREGFVEKI QTWCGNESFA RWCSYADRQG DLFAA
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