Gene PSPTOA0023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTOA0023 
Symbol 
ID1187372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004633 
Strand
Start bp24612 
End bp24962 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content65% 
IMG OID637408356 
Producthypothetical protein 
Protein accessionNP_808681 
Protein GI29171497 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value0.00115594 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCGCGGG CGCAGCCGAA CCCTTGTCAG GTGCCGCGCT CGATCTACCG TCAAGCGCAC 
GGCGAAAGGT GCGCAGCAAA GCCTGCAGGT GATACGGGAA GTACAGGCAG CGACGGCAAG
CGGAGCGCGC AGGCCGAGAG GCCGGAGGCG TTAGAGCCGG CTTGCCGGCG AGGATTGAAG
CCCGAAGGGG CGAGACGGGC CGGCTTCATG GCCTGGCTCG ATGCGCAGCA CGAAAGCCCG
GCCCTGAGCG CAGCGAAGGG AACGCACGTC AGAGGTTGTC AAATCGAACT GCACCGAGGC
TCAAACAGCC AGGCCACTCC TCTCCTCCTG CGATTGAGCA GATCTGAGTG A
 
Protein sequence
MSRAQPNPCQ VPRSIYRQAH GERCAAKPAG DTGSTGSDGK RSAQAERPEA LEPACRRGLK 
PEGARRAGFM AWLDAQHESP ALSAAKGTHV RGCQIELHRG SNSQATPLLL RLSRSE