Gene PSPTOA0022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTOA0022 
Symbol 
ID1187371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004633 
Strand+ 
Start bp24081 
End bp24662 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content54% 
IMG OID637408355 
Producthypothetical protein 
Protein accessionNP_808680 
Protein GI29171496 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value0.00175186 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGCCATT TTGAACACAC CCTCCCTGTG CTCAGGACTG GTCTTTTGGC CGCACCTGAA 
GCCTACAACT GTGTCTTCAT ACAGGTTACA TGTGGTTGCA GTTACGGTAG ATTCGACTTT 
CATCAACCTG GACCTACCAC CATGACTGTC GATCCTGACC CGCTTGGTCT TGCAACAAAG 
ATCATCCAAC ACTACAGCAA CGCCCAGATC GCCCAGTTGA TCAGGATTAT TAGTCCAGTT 
TCTCCCTGCG CCCTAATGAC CGCAGAGGAG TTTGAGCGAG TCATGGTCGT ACTTGCCGGC 
CAGAATCGAC GACGAGCGTT CTCCGATCGT TCGATAAATG CTGCCAGGCT TGTCCTGGTT 
ATGGGTGCCA GCGTGTCCGA AGCGGCTTTG GAAACTGGAT TGGCCAGGCA GGTGGTTCAC 
AGACTCATGA CACGTATTCG GTCGCGCCTG GAGGGTTTGC CGGCTAATTG GGTAAAGGTC 
GAAGCCTGGC TGCCCCCTGC AACTGCAGGC GATGTTCTGG CATTAGCTCA ATCACTCAGA 
TCTGCTCAAT CGCAGGAGGA GAGGAGTGGC CTGGCTGTTT GA
 
Protein sequence
MRHFEHTLPV LRTGLLAAPE AYNCVFIQVT CGCSYGRFDF HQPGPTTMTV DPDPLGLATK 
IIQHYSNAQI AQLIRIISPV SPCALMTAEE FERVMVVLAG QNRRRAFSDR SINAARLVLV 
MGASVSEAAL ETGLARQVVH RLMTRIRSRL EGLPANWVKV EAWLPPATAG DVLALAQSLR 
SAQSQEERSG LAV