Gene PSPTOA0021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTOA0021 
Symbol 
ID1187370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004633 
Strand- 
Start bp23291 
End bp23956 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content56% 
IMG OID637408354 
Productresolvase, putative 
Protein accessionNP_808679 
Protein GI29171495 
COG category[L] Replication, recombination and repair 
COG ID[COG1961] Site-specific recombinases, DNA invertase Pin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value0.00853796 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATACAAT CATTTGACTA CACCCAAAAT GAGACGGATC TACTGATGTT CATTCGTGCA 
TACCTTCGAG CATCGACCGA TGACCAGGAC GCAAGTCGAG CGCGCGATTA TTTGGAAACG 
TTTGTCTCCG GCTACGGCAA GGCCATCGCA TCGTGCTACA TGGAAAATGC CAGTGGCAGC 
CATGCCGACC GCCCGGAATT AATCCGACTA CTCAAAGATG CTCGCCGAGG TGACGTGCTG 
CTGGTGGAAA GCATCGATCG GCTGTCGCGA ATGGATGACC AGGCTTGGCG ATCCCTCAAA 
ACAGCAATCG ATAACCGAGG CATACGGATC GTCTCTGTGG ATCTGCCTAC CAGTCATCAA 
GGCATGACGG CCCAGTCGGG GGACGAGTTC ACCGACCGCA TGCTGGCGGC CATCAACTAC 
ATGATGATCG ATATGATGGC CGCGATTGCC AGGAAGGACT ATCAGCAAAG AAGACTGCGC 
CAGGCACAAG GGATTGAGAA GGCAAAAGCT TCAGGCGTCT ACAAAGGCAG ACCCGTAGAC 
GCAGAGCTGC GTAACCGAGT GCGTGAGCTG CTGGCTGCAG GTCTCGGGAT CCGCGCAGTA 
GCGAGGCACG CTGCGTGTTC AACTACGACC GTCATGAAGG TCCGCGACGA GCTGGCGCAA 
CGTTAG
 
Protein sequence
MIQSFDYTQN ETDLLMFIRA YLRASTDDQD ASRARDYLET FVSGYGKAIA SCYMENASGS 
HADRPELIRL LKDARRGDVL LVESIDRLSR MDDQAWRSLK TAIDNRGIRI VSVDLPTSHQ 
GMTAQSGDEF TDRMLAAINY MMIDMMAAIA RKDYQQRRLR QAQGIEKAKA SGVYKGRPVD 
AELRNRVREL LAAGLGIRAV ARHAACSTTT VMKVRDELAQ R