| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTOA0010 |
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| Symbol | |
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| ID | 1187317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004633 |
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| Strand | - |
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| Start bp | 11224 |
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| End bp | 14193 |
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| Gene Length | 2970 bp |
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| Protein Length | 989 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637408345 |
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| Product | Tn3 family transposase |
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| Protein accession | NP_808670 |
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| Protein GI | 29171486 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4644] Transposase and inactivated derivatives, TnpA family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACGTC GCTCGATTCT TTCCCTTGCG GAGCGGGAAA GCTTACTGGC GTTGCCAGAT
TCCCAAGATG AAATGATTCG TCACTACTCT TTCAGCGAAA CCGACCTCGC CATCATCCGC
CAACGGCGTG GGTCTGCAAA TCGGCTGGGC TTCGCTGTAC AGCTCTGTTA CATGCGCTAT
CCCGGGGTAA CACTTGCTAT GGATGAAGAA CCATTCGAGC CATTGCTGCG CTTGGTGGCC
ACGCAACTGA AGGTGCCGCC TGAAGCATGG GCTGACTATG GGCAACGCGC CGAGACGCGC
CGCGAGCACC TGTTGGAATT ACAAGCTCTT TTTGAGTTTC AGCCATTCAC AACAAGACAT
TATCGTCCCT GCGTTCATAG TTTGGATGAA CTGGCATGGC AGTCCGACAA AGGCTTCGTG
TTGGCGACGG AGTTGGTTGA AGGGTTGCGA CGACAGAACA TATTGCTTCC ATCACCAGGT
GTGATCGAGC GCATTTGTGC TGAGGCAATC ACCCGCGCCA ATCGGCGGAT CTATGAAGCC
TTGTCCGAGC CTCTTTCGAA TACACACCGC CGTTGCCTCG ATGGCCTCCT TAGACGCCGA
GACAAAGGCC AGACCACCTG GTTGGCCTGG TTACGCCAGT CGCCAGTTAA ACCGAACTCA
CGGCACATGC TTGAACACAT CGAGCGCCTC AAAGCATGGC AGGCTCTCGA TCTACCAGCA
GGCATTGAGC GGCTGGTTCA CCAGAATCGC CTGCTCAAAA TTGCCCGTGA AGGCGGCCAA
ATGACACCTG CTGACTTGTC CAAGTTCGAA TTGCAACGAC GCTACGCTAC CCTTGTGGCA
CTGGCCATCG AGGGCATGGC CACCGTCACT GACGAAATCA TCGACCTGCA CGATCGTATC
CTGGGCAAGC TGTTTAACGC AGCCAAGAAT AAACACCAGA AACAGTTCCA GGCATCCGGA
AAAGCGATCA ACGCAAAGGT GCGAATTTAT GGACGCATCG GCCAAGCCCT GCTGGAGGCC
AAGCAAAACG GCTGCGATCC GTTTGCTGCC ATCGAAGCGG TCATGTCTTG GGAGGCTTTC
GCCAAGAGTG TCACCGAAGC GCAAAAACTT GCACAGCCCG AAGACTTCGA CTTCCTGCAC
CGCATCGGCG AGAGCTACGC CACGTTGCGC CGCTATGCTC CGCAGTTTCT CGACGTACTC
AAGCTGCGGG CTGCGCCCGC AGCCAAGGAC GTGTTTGAAG GCATTGAGGT ATTGCGCGCA
ATGAACACTG ACAACGCCCG TAAGGTTCCC GTCGATGCCC CGATCGGGTT CATCAAGAAG
CGCTGGAAGA AACTGGTTAT AACCGACGGC GGTATCGACC GGCGCTACTA CGAACTGTGC
GTGATGTCGG AACTAAAGAA CGCGCTGCGC TCTGGAGATA TTTGGGTGCA GGGATCGCGT
CAGTTCAAGG ACTTCGAGGA TTACCTGATG CCATCCGAGA AATTCGCCCA TCTCAAGCTG
GCCCATGAAT TGCCTCTGGC CGTAGCCACC GACTGCGACA AATACCTGAA CGACCGGTTG
ACGCTGTTGG AAGCTCAGCT TGCCACCGTG AACCGCATGG CTCTAGCCAA TGACTTACCG
GATGCCATCA TCACCGAGTC TGGTTTGAAG ATCACGCCTC TGGATGCGGC AGTGCCAGAT
ACCGCACAGG CGTTGATTGA TCAAACCGCA ATGGCTATGC CGCATATCAA GATCACCGAA
TTGTTGTTGG AGGTGGACGA GTGGACAGGA TTCACCCGGC ATTTCGCACA TCTGAAATCG
GGTGACCTGG CCAAGGATAA GCACTTACTG TTGTCCACCA TCCTGGCTGA TGCGATCAAC
CTAGGCCTGG CTAAAATGGC CGAGTCTTGC CCTGGCACCA CCTACGCAAA ACTGTCCTGG
CTACAAGCCT GGCACATCCG TGACGAAACC TATTCGGCCG CGCTGGCTGA GCTAGTAAAC
GCGCAGCTCC AACATCCTTT TTCCAAGCAT TGGGGTGACG GTACCACATC ATCGTCAGAT
GGACAGAATT TCAGAACTGG CAGCAAAGCC GAGAGTACGG GTCACATCAA TCCCAAATAC
GGCAGCAGCC CGGGACGAAC TTTTTACACC CACATTTCTG ACCAGTACGC CCCGTATCAC
CTGAAGGTGG TCAACGTTGG CGTGCGCGAT TCTACCTATG TGCTTGACGG GCTTCTGTAT
CACGAATCTG ACCTGCGTAT TGAGGAGCAC TACACGGATA CTGCGGGCTT CACAGATCAC
GTCTTCGGTC TGATGCATTT ACTGGGTTTT CGCTTTGCAC CGCGCATCCG CGACCTAGGC
GATACCAAGC TGTTCGTGCC CCAAGGAAAT ATCGATTATG ACGCGATTAA GTCAATGATT
AGTAAAGAAA AACTGGATAT CAAGGCCATT CGGACGCACT GGGATGAAAT TCTGAGGCTG
GCCACCTCGA TCAAACAAGG TACCGTGACT GCCTCGCTGA TGTTGCGCAA GCTGGGTAGT
TATCCTCGGC AGAACGGCTT AGCCGTTGCC CTTCGCGAAA TCGGTCGCAT CGAACGCACG
CTGTTCATTT TGGACTGGCT ACAAAGTGCC GAGCTGCGCC GTCGTGTGAA TGCAGGACTG
AACAAGGGCG AAGCGCGCAA TGCGCTGGCC AGGGCTGTCT TCTTTAACCG GCTGGGCGAA
ATCCGAGACC GTAGCTTCGA ACAGCAACGC TACCGTGCCA GCGGCCTCAA CTTGGTGACT
GCTGCAATAG TGCTGTGGAA CACGGTTTAC CTGGAGCGGT CCGCAAACGC ATTACGCGGA
CATAGCACCG CTGTCGATGA ATCGCTGCTG CAGTACCTGT CGCCGCTGGG CTGGGAGCAC
ATCAACCTAA CTGGTGATTA CCTGTGGCGC AGCACCGTCA AGGTTGGTGG AGGAAGATTC
CGGCCATTAC GACGACTGAA ATCAGCTTAA
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| Protein sequence | MPRRSILSLA ERESLLALPD SQDEMIRHYS FSETDLAIIR QRRGSANRLG FAVQLCYMRY
PGVTLAMDEE PFEPLLRLVA TQLKVPPEAW ADYGQRAETR REHLLELQAL FEFQPFTTRH
YRPCVHSLDE LAWQSDKGFV LATELVEGLR RQNILLPSPG VIERICAEAI TRANRRIYEA
LSEPLSNTHR RCLDGLLRRR DKGQTTWLAW LRQSPVKPNS RHMLEHIERL KAWQALDLPA
GIERLVHQNR LLKIAREGGQ MTPADLSKFE LQRRYATLVA LAIEGMATVT DEIIDLHDRI
LGKLFNAAKN KHQKQFQASG KAINAKVRIY GRIGQALLEA KQNGCDPFAA IEAVMSWEAF
AKSVTEAQKL AQPEDFDFLH RIGESYATLR RYAPQFLDVL KLRAAPAAKD VFEGIEVLRA
MNTDNARKVP VDAPIGFIKK RWKKLVITDG GIDRRYYELC VMSELKNALR SGDIWVQGSR
QFKDFEDYLM PSEKFAHLKL AHELPLAVAT DCDKYLNDRL TLLEAQLATV NRMALANDLP
DAIITESGLK ITPLDAAVPD TAQALIDQTA MAMPHIKITE LLLEVDEWTG FTRHFAHLKS
GDLAKDKHLL LSTILADAIN LGLAKMAESC PGTTYAKLSW LQAWHIRDET YSAALAELVN
AQLQHPFSKH WGDGTTSSSD GQNFRTGSKA ESTGHINPKY GSSPGRTFYT HISDQYAPYH
LKVVNVGVRD STYVLDGLLY HESDLRIEEH YTDTAGFTDH VFGLMHLLGF RFAPRIRDLG
DTKLFVPQGN IDYDAIKSMI SKEKLDIKAI RTHWDEILRL ATSIKQGTVT ASLMLRKLGS
YPRQNGLAVA LREIGRIERT LFILDWLQSA ELRRRVNAGL NKGEARNALA RAVFFNRLGE
IRDRSFEQQR YRASGLNLVT AAIVLWNTVY LERSANALRG HSTAVDESLL QYLSPLGWEH
INLTGDYLWR STVKVGGGRF RPLRRLKSA
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