Gene PSPTO_5600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5600 
SymbolatpG 
ID1187292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp6382756 
End bp6383616 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content56% 
IMG OID637396913 
ProductATP synthase F1, gamma subunit 
Protein accessionNP_795318 
Protein GI28872699 
COG category[C] Energy production and conversion 
COG ID[COG0224] F0F1-type ATP synthase, gamma subunit 
TIGRFAM ID[TIGR01146] ATP synthase, F1 gamma subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGGCG CAAAAGAGAT TCGCAGCAAG ATTGCGAGCA TCAAAAGCAC GCAAAAGATC 
ACCAGCGCCA TGGAAAAAGT GGCGGTCAGC AAAATGCGCA AGGCTCAAAT GCGTATGGCT
GCTAGCCGTC CTTACGCGGA GCGCATTCGT CAGGTGATTG GTCACCTGGC AAACGCCAAC
CCGGAGTATC TCCACCCGTT CATGATCGAG CGCCCTTTGA AGCGTGTCGG TTATGTCGTA
GTGAGCAGTG ACCGTGGTCT GTGTGGTGGC TTGAATACCA ACCTGTTCAA GACTCTGGTC
AAGGACATGG CGGTGAACCG TGAAAACGGT GTAGAGATCG ATCTGTGCGT GGTCGGCAGC
AAAGGTGCGG CATTTTTCCG CAACTTCGGC GGTAACGTCG TCGCTGCGAT CAGCCACCTG
GGCGAAGAGC CGTCGATCAA CGACTTGATC GGCAGCGTCA AGGTGATGCT GGATGCCTAC
CTGGATGGCC GTATTGATCG CCTGTCCGTG GTATCCAACA AGTTCATCAA CACCATGACC
CAGCAACCCA CCGTGGAGCA ATTGATTCCG CTGGTGGCAA CCCCGGATCA AGGGCTCAAG
CACCACTGGG ACTATCTCTA CGAACCCGAC GCCAAAGAGC TGCTTGACGG CCTGATGGTT
CGCTACGTGG AATCGCAGGT GTACCAGGCG GTGGTCGAGA ACAACGCAGC TGAACAAGCG
GCGCGGATGA TCGCGATGAA GAACGCCACA GACAACGCCG GTGATTTGAT CAGTGATTTG
CAGCTGATCT ACAACAAGGC GCGTCAGGCA GCGATCACCC AAGAGATCTC GGAAATCGTC
GGCGGCGCTG CCGCGGTTTA A
 
Protein sequence
MAGAKEIRSK IASIKSTQKI TSAMEKVAVS KMRKAQMRMA ASRPYAERIR QVIGHLANAN 
PEYLHPFMIE RPLKRVGYVV VSSDRGLCGG LNTNLFKTLV KDMAVNRENG VEIDLCVVGS
KGAAFFRNFG GNVVAAISHL GEEPSINDLI GSVKVMLDAY LDGRIDRLSV VSNKFINTMT
QQPTVEQLIP LVATPDQGLK HHWDYLYEPD AKELLDGLMV RYVESQVYQA VVENNAAEQA
ARMIAMKNAT DNAGDLISDL QLIYNKARQA AITQEISEIV GGAAAV