Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_5600 |
Symbol | atpG |
ID | 1187292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 6382756 |
End bp | 6383616 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637396913 |
Product | ATP synthase F1, gamma subunit |
Protein accession | NP_795318 |
Protein GI | 28872699 |
COG category | [C] Energy production and conversion |
COG ID | [COG0224] F0F1-type ATP synthase, gamma subunit |
TIGRFAM ID | [TIGR01146] ATP synthase, F1 gamma subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGGCG CAAAAGAGAT TCGCAGCAAG ATTGCGAGCA TCAAAAGCAC GCAAAAGATC ACCAGCGCCA TGGAAAAAGT GGCGGTCAGC AAAATGCGCA AGGCTCAAAT GCGTATGGCT GCTAGCCGTC CTTACGCGGA GCGCATTCGT CAGGTGATTG GTCACCTGGC AAACGCCAAC CCGGAGTATC TCCACCCGTT CATGATCGAG CGCCCTTTGA AGCGTGTCGG TTATGTCGTA GTGAGCAGTG ACCGTGGTCT GTGTGGTGGC TTGAATACCA ACCTGTTCAA GACTCTGGTC AAGGACATGG CGGTGAACCG TGAAAACGGT GTAGAGATCG ATCTGTGCGT GGTCGGCAGC AAAGGTGCGG CATTTTTCCG CAACTTCGGC GGTAACGTCG TCGCTGCGAT CAGCCACCTG GGCGAAGAGC CGTCGATCAA CGACTTGATC GGCAGCGTCA AGGTGATGCT GGATGCCTAC CTGGATGGCC GTATTGATCG CCTGTCCGTG GTATCCAACA AGTTCATCAA CACCATGACC CAGCAACCCA CCGTGGAGCA ATTGATTCCG CTGGTGGCAA CCCCGGATCA AGGGCTCAAG CACCACTGGG ACTATCTCTA CGAACCCGAC GCCAAAGAGC TGCTTGACGG CCTGATGGTT CGCTACGTGG AATCGCAGGT GTACCAGGCG GTGGTCGAGA ACAACGCAGC TGAACAAGCG GCGCGGATGA TCGCGATGAA GAACGCCACA GACAACGCCG GTGATTTGAT CAGTGATTTG CAGCTGATCT ACAACAAGGC GCGTCAGGCA GCGATCACCC AAGAGATCTC GGAAATCGTC GGCGGCGCTG CCGCGGTTTA A
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Protein sequence | MAGAKEIRSK IASIKSTQKI TSAMEKVAVS KMRKAQMRMA ASRPYAERIR QVIGHLANAN PEYLHPFMIE RPLKRVGYVV VSSDRGLCGG LNTNLFKTLV KDMAVNRENG VEIDLCVVGS KGAAFFRNFG GNVVAAISHL GEEPSINDLI GSVKVMLDAY LDGRIDRLSV VSNKFINTMT QQPTVEQLIP LVATPDQGLK HHWDYLYEPD AKELLDGLMV RYVESQVYQA VVENNAAEQA ARMIAMKNAT DNAGDLISDL QLIYNKARQA AITQEISEIV GGAAAV
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