| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5569 |
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| Symbol | |
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| ID | 1187261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 6347028 |
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| End bp | 6348653 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637396888 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | NP_795293 |
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| Protein GI | 28872674 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCTCA GATCTCTGAA AATCGCACAT AGAGCTTTCC TATGCTTCGG CGTCATTACT
CTGCTTTTGA TCGGCTTGGG TGGTTTCTCC TACGTTCAAA TTGGTCATTT GCGCGCAGCG
GAACAAAACA TTGAGCAAAA CTCGCTACCC AGCATTCAGG TCATTGATGA CATTCAGATC
GCGCTTCTTC ATGCACGTCT TGAAAGTATA AGAATGCTAG CAAGTACAGA TCCTGACGTT
AAAAAGGCAT CGGAGGCCAA GGTGCGACAA GCAATGGACA CCCTTCAATC ACGCAGCGAT
TTCTATCAAA AAAATCTCAT ATCAGGTGAA CAAGATCGCT CTCAATTTGA CGATGCCCGT
AACAAAATGA GCAATTACCT TGGCGGTTTG AAGCAGGTGA TTGCAATGGA TGTTGCCGAC
CATGAACAAG CCGTATCTTT TGCCAATTCG GAACAGGCCG ACAGGGCGAG CGCTTATCAG
GAAACCTTGA CGACAATCCG CGATGAGAAT GCAAAGGAAG CACAGCAGTC GGGGGCAGAT
GCAACATCGG TTTACAACCA TAGCGTCAAC GTTATGATAG CTGTTGTCGT ACTCGCCTCT
ATTCTGACCG TCATTCTCGC AATCACCATG ACACGCAGCA TTGTAGGGCC TATGAGCGTA
TCTCTGAAAC TTGCTGAAGA TATTGCCGAA GGTGACTTGA CCCGACATCT TGAGGTTACC
GGCAGGGATG AGGCCTCAAG GTTGATGCAG GCGCTTAACC AGATGTCTGG GAAATTGAGG
AGCACCATTC AAGATATCTC CGGTGCCTCT ACGCAACTGA GCACCGCTGC CGTAGAAATG
ACATCCATCA CCGAAAGCGC AGACCGTACG CTGCAGCAAC AAAATAGCGA AATTGAACAG
GCTGCGACCG CCGTCAACGA GATGAGCGCT GCCGTAGATG AGGTTGCACG TAATGCTACG
TCGACATCTC AAGCAGCCCA GCAATCCAGT GCATCAGCAG ATCTGGGCAA TAGCCGTGTC
GCTGAGACCC TAACCGCCAT GCAAGCGTTG ACGGGCTTGG TCGAAGGTTC ATCAGCACAA
GTATTAGCAC TCGCAGGCCA GGCCCAAGAC ATCAGTAAGG TACTGAGTGT AATTAGAGGC
ATCGCTGAGC AGACCAATCT ATTGGCACTG AACGCCGCAA TCGAAGCTGC CCGAGCAGGT
GAGCAAGGCA GAGGCTTTGC AGTTGTTGCA GACGAGGTGC GCGCCTTGGC GCATCGCACA
CAGACTTCTA CTCAGGAAAT CGAGCAGATG ATCTCGGCCA TACAGGCAGG CTCGTCTGCT
ACTGTGGAGT CGATGCAAAA AAGCACTCAG GAAGTGCATA GCACTCGCAA AACCGCAGAA
GACGCAGGAC AGTCTTTGCG ACAGATCGCA AATTCTGTGC TGGAGATAAA CGAACGCAAC
CTGCAGATCG CAACGGCGTC CGAACAACAA GCGCACGTAG CGCGCGATGT CGATCGCAGC
CTGGTCAGTA TTCGCGATCT CGCAATGCAA AGCAGTGAGG GAACTCGCCA GACGCTCATC
GCCAGTAACG AGCTATCGCA GCTGGCAGTC AACCTGAATG ATCTGGTACT TCGATTCCGG
ACTTGA
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| Protein sequence | MNLRSLKIAH RAFLCFGVIT LLLIGLGGFS YVQIGHLRAA EQNIEQNSLP SIQVIDDIQI
ALLHARLESI RMLASTDPDV KKASEAKVRQ AMDTLQSRSD FYQKNLISGE QDRSQFDDAR
NKMSNYLGGL KQVIAMDVAD HEQAVSFANS EQADRASAYQ ETLTTIRDEN AKEAQQSGAD
ATSVYNHSVN VMIAVVVLAS ILTVILAITM TRSIVGPMSV SLKLAEDIAE GDLTRHLEVT
GRDEASRLMQ ALNQMSGKLR STIQDISGAS TQLSTAAVEM TSITESADRT LQQQNSEIEQ
AATAVNEMSA AVDEVARNAT STSQAAQQSS ASADLGNSRV AETLTAMQAL TGLVEGSSAQ
VLALAGQAQD ISKVLSVIRG IAEQTNLLAL NAAIEAARAG EQGRGFAVVA DEVRALAHRT
QTSTQEIEQM ISAIQAGSSA TVESMQKSTQ EVHSTRKTAE DAGQSLRQIA NSVLEINERN
LQIATASEQQ AHVARDVDRS LVSIRDLAMQ SSEGTRQTLI ASNELSQLAV NLNDLVLRFR
T
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