Gene PSPTO_5557 details

Gene Information

• Locus tag: PSPTO_5557
• Symbol: cysC
• ID: 1187249
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: -
• Start bp: 6331415
• End bp: 6332083
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 637396876
• Product: adenylylsulfate kinase
• Protein accession: NP_795281
• Protein GI: 28872662
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG0529] Adenylylsulfate kinase and related kinases
• TIGRFAM ID: [TIGR00455] adenylylsulfate kinase (apsK)

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGAAAAAA ATGTATTCTC GTTATGTGTG CACAACCCTG AATGGATGAT CATGGAAAAC 
TCACAGGGCG GACAGAGTCT TGTCTGGCAA CCCAGCCAGG TCTCTTCAAA GGACCGCGAG 
CAGCACTTGC GCCAGACGCC GAAGACGGTG TGGCTGACGG GACTCAGCGG CTCAGGAAAA 
TCCACCATTG CTTTCGCGCT CGAGCGAGCG CTGATGGACC TCGGCAAACT TGCCTACACC 
CTTGATGGCG ACAACATTCG TCAGGGTTTA TGCCGTGATC TGGGCTTTTC TGCCGAGCAC 
CGTTCGGAGA ACATCCGACG CATTGCTGAA GTTGCCCGAT TGATGAATGA CGCAGGCTTG 
ATCGTTATCT CATCATTCAT TTCGCCCTAT GAGGCGGACC GCGAAGCAGC CCGTTCGATC 
ATTGGCAATG AACGCTTCAT GGAAGTATTT ATCAGCACTC CCCTGGAAAC CTGCATTCAG 
CGTGACCCCA AAGGGCTTTA TCGCAGGGCT GTGGCAGGAG AATTGAAAGA CTTTACCGGC 
ATCAGCGCCC CGTATGAGTC GCCGTTGTAT CCCGTGCTGC AACTGGACAC CCGCCATGTA 
CCCATTGAAG AGTGCGTCGC ACGGATTCTG GATATTCTTC AGATAACAAA AAACCATTTT 
CGCGCCTGA 

 

Protein sequence

MEKNVFSLCV HNPEWMIMEN SQGGQSLVWQ PSQVSSKDRE QHLRQTPKTV WLTGLSGSGK 
STIAFALERA LMDLGKLAYT LDGDNIRQGL CRDLGFSAEH RSENIRRIAE VARLMNDAGL 
IVISSFISPY EADREAARSI IGNERFMEVF ISTPLETCIQ RDPKGLYRRA VAGELKDFTG 
ISAPYESPLY PVLQLDTRHV PIEECVARIL DILQITKNHF RA