| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5553 |
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| Symbol | |
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| ID | 1187245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 6325129 |
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| End bp | 6327051 |
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| Gene Length | 1923 bp |
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| Protein Length | 640 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637396872 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | NP_795277 |
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| Protein GI | 28872658 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAGCG GCTTCGCGAA TATCAGCGTC AACATGAAGT TGGCATTGGG CTTTGGGACA
GTTCTTTTTT TCACTGCCAT TCTCGCCTTC GTCGGCTGGA CCAGCCTCGA CAAACTCATC
TATCGCACCG ACAGAATCGG CAACATCACT GAACTCAGCA ACAACCTGAC CAACCTGCGG
GTTGCGCGTC TGCAGTACAT GCTCACCGAA GGCGACGAGA CCGCCGCGCA GAACATGCAG
AGCAAACTGG ACGTCTTCCG CACGCACCAG CAATCGCTGC TGACACAGTT CACCAACCCG
CTTAACCTGA AGCCTCTGGG TGAGTTGTCG GATATCACCC GCGATTACGA AGCATCGCTG
AACCGCATGC GCGCGGCGTA TCAGTCCGGT GCCAAAGTGC GTGGCGAGAT AGCCACCCAT
GCTGGCGCTG CTTCTCAAAC CATTGAATCG CTGAACAATG CCGTGATGCA GATGGACCCT
TCGGAGCCGG CGCGTTTCGA CCAGGCCTTG TTGGTAAACA CCGCCAGGCA GGACCTGCTG
TTGGTGGGCA ATGAAGTGCG TGGTTACACC GCCAAGCCGG ATGAAAAGAC CGAGAAGGCT
GTCTTCCAAC TGCTCGATAC TGCCATCAGC CATCTGGACA AACTGAAATC CGCTTTTGAT
GCGGGCAATC GCGAGCGGAT TACGCAACTG GAAACCGCTC TGCGTAACTA CCGTGCCTCG
ATCGATGCGT TCAAGGTGAC GACCCAGACC GCTGGCGCAG TTCGTAAAGA CCTGACCACG
CAAGGTGCGG CCATCGTCAA ACTGGGCGAA GAGCTGTATG GCATCCAGAT GCAACTCGCC
AAGGCAGATA CCGCCAAAGC GCGAAACTTG CAGTTGGGCT GCGTTGTGCT GGTGATGCTG
TTCGGCATTC TGGCGGCCGT CATCATTACC CGTCAGATCA CCCGTCCGCT GCGCGATACG
CTGGCCATTG TCGAGCGCAT TGCGTCCGGC GACCTGACCC ATTCGGCGGC CATCACCCGA
CGCGACGAAC TGGGCGTGTT GCAACAGGGC ATCCAGCGCA TGGGCGCAAC CCTGCGCGAC
CTGATTTCCG GGATTCGCGA CGGCGTGACG CAGATTGCCA GCGCTGCCGA GCAATTGTCG
GCGGTCACCG AGCAGACCAG CGCTGGCGTC AACAGCCAGA AGGTCGAGAC CGATCAGGTC
GCCACTGCCA TGCACGAGAT GTCCGCCACT GTTCACGAAG TTGCGCGCAA CGCTGAGCAA
GCATCCGTTG CCGCATCGGA TGCCGACAAG CAGGCGCGTG AGGGCGACAA GGTGGTGGGC
GAAGCCATCC AGCAGATCGA ACGACTGGCT GCCGAAGTCG TCCGTTCGTC TGATGCGATG
AATGTGCTGG AGCAGGACAG CGACAAGATC GGCAAGGTCA TGGACGTGAT CAAGGCGGTT
GCCGAACAGA CCAACTTGCT CGCGCTCAAT GCGGCCATCG AGGCCGCGCG TGCGGGTGAG
GCGGGTCGTG GTTTTGCGGT GGTTGCCGAT GAAGTGCGCG GTCTTGCCCA GCGCACTCAG
CAGTCCACCG AAGAAATCGA AGGCCTGGTC GCTGCCTTGC AAAACGGCAC TCGTCAGGTG
TCGGGCATCA TGCTGGGCAG CCGCACGCTG ACTGACAGCA GCGTCGAGTT GACGCGCAAG
GCGGGTACGT CACTGGAAAG CATTACCCGT ACGGTGTCGA ACATCCAGGC CATGAACCAG
CAGATTGCAG CGGCTGCCGA ACAACAAAGC TCGGTCGCCG ACGAAATCAG CCGCAGCATC
GTCAACGTTC GCGACGTGTC CGAACAGACC GCCGAAGCCA GCGAAGAAAC CGCAGCATCC
AGCGTCGAAC TGGCACGCCT GGGTGGCCAG TTGCAGATGA TGGTCAGCCA CTTCCGGGTG
TGA
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| Protein sequence | MNSGFANISV NMKLALGFGT VLFFTAILAF VGWTSLDKLI YRTDRIGNIT ELSNNLTNLR
VARLQYMLTE GDETAAQNMQ SKLDVFRTHQ QSLLTQFTNP LNLKPLGELS DITRDYEASL
NRMRAAYQSG AKVRGEIATH AGAASQTIES LNNAVMQMDP SEPARFDQAL LVNTARQDLL
LVGNEVRGYT AKPDEKTEKA VFQLLDTAIS HLDKLKSAFD AGNRERITQL ETALRNYRAS
IDAFKVTTQT AGAVRKDLTT QGAAIVKLGE ELYGIQMQLA KADTAKARNL QLGCVVLVML
FGILAAVIIT RQITRPLRDT LAIVERIASG DLTHSAAITR RDELGVLQQG IQRMGATLRD
LISGIRDGVT QIASAAEQLS AVTEQTSAGV NSQKVETDQV ATAMHEMSAT VHEVARNAEQ
ASVAASDADK QAREGDKVVG EAIQQIERLA AEVVRSSDAM NVLEQDSDKI GKVMDVIKAV
AEQTNLLALN AAIEAARAGE AGRGFAVVAD EVRGLAQRTQ QSTEEIEGLV AALQNGTRQV
SGIMLGSRTL TDSSVELTRK AGTSLESITR TVSNIQAMNQ QIAAAAEQQS SVADEISRSI
VNVRDVSEQT AEASEETAAS SVELARLGGQ LQMMVSHFRV
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