| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5547 |
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| Symbol | |
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| ID | 1187239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 6317770 |
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| End bp | 6319656 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637396866 |
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| Product | acyltransferase family protein |
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| Protein accession | NP_795271 |
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| Protein GI | 28872652 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1835] Predicted acyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACTTCA GAAAAGACAT CAATGGCCTG CGCGCCATTG CGGTTATCGC CGTGCTGCTG
TTTCACTTTC ACCCTGCCTG GCTGCCTGGC GGTTTTGCCG GGGTGGATGT GTTTTTTGTG
ATCTCGGGGT ATCTGATTAC CGGAATCATC ATGCGCGGCC TGAGAAACGG CAGCTTCAGG
TTGACGGCGT TCTATGCGTC ACGGGCCAGG CGCATCGTCC CGGCACTGGC GGCGGTATGC
CTGGCCTTGT TGCTGGCGGG CTGGTTTTAC CTGCTGCCAC TGGACTACAG CGCGCTGGGG
ACGCACGTGG CCAGCAGCCT GGGGTTTGTT TCGAACATTG TGTATTGGCG CGAGGCCGGC
TACTTCACCG CCAGCGCCCA TGAGAAATGG CTGTTGCACA CCTGGTCACT GTCAGTCGAA
TGGCAGTTTT ACCTGCTGTA CCCGATCGCA CTGCTGATGC TCAGCCACTT CGTCGCGCTG
CACAACCTGC GCTGGTGGGT GCTGGGCGGG TGCCTGACGG GTTTCATTTT TTGCGTATTT
GCGTCGTCGC AATGGCCGGA GGCGGCGTTT TACCTGTTGC CGACCCGCGC CTGGGAATTG
TTGTCAGGCG GCGTGGCGTG CCTGTTTCCG TTTCAACTGA GAGCCCTACA GCAGCGCGTT
CTGGAACAGG TCGGGCTGGC AATGATCGTG GTCGGTTTCT TCGCGCTGTC AGTGCAGGAC
ACATGGCCGG GATACCTGGT ACTGCTGCCG GTGCTGGGGA CTTTCGCGGT GATCGCGGCA
GCACGCAACG ACTCGCTGCT GACCTGCAAC CCGCTGTCGC AATGGACCGG CAAGCTGTCG
TACTCGCTGT ATCTCTGGCA CTGGCCGGTG GTGGTGTGGA TGAGTTACGC CGGCTGGCTG
GGCGAGCTGC GCAACGTGTC ACTCGGCATC GGCGTGGCCT TGATGCTGGC GCTGGCGTCG
TGGCGGCTGA TCGAGCAGCC CTTCGGCACA CGCCAACCTG CGAGGCCCTG GAGATTTGCC
CCGCTCGGCA CACTGATTGT TCTGGTATTC ACGGGCGGCG CGCTGGTCAG TGCGACTCAG
GGAGTGATAT CGCCGGTGCG CCCGATCAGT CTTTCGGACA AGGCGCATTT CATCCAGGAA
TACGTTGACC GCCAGCACAA CCTTTACGAA CCTTACTGGC TGAAGTGTGA CGCGTTTTCA
GCCCAGACCC AGCGCGGTCA AACCGACATC GACGAGGCGT GCACGCGCAA ACAGGGCACG
GGGGGCGTGT TTCTGTGGGG CGACTCCCAC GCGCAGGCGC TGTCGCTCGG GCTGCGCACT
TTGCTGGCGC GCACTACGCC GTTCTATCAA GTAGCGTCGG CCAGTTGCCT GCCCAGCCTC
AGCGACCATG ACGGACGCGC GTCGGCGACC AGCCGGGCTT GTGATTATTC CAACCGCACC
GCGCTGCAAG GCATCGAGAG GCTGCACCCG GATATCGTGG TCATCGCGCA AAAGGATAGC
CACGACAAGA CCGACTGGAA CCGTATCGCA GCCCGGCTCA AGCGCCTGGG CGTGAAACAC
ATTGTGTTGA TCGGCCCGCT GCCGTCGTGG AATCCATCGC TGCCCAGCGT CATCGCCAAC
CGTCACTGGG GGCTGACCGA GTCATACATC AGCGATCCGG CGCTGGACCA GAACGTCATG
GCGGTGGATC AGGCCACCCG CGAGCTGGCG GCGTCGGCGG GCATTCAGTT CGTTTCGCTG
ATCGACAAAC TGTGCATCGC CGACGCCTGC CGGGTGCGTC CGGAAAACAG CACCTCACTG
CTGCAGATCG ACTCCGGGCA CCTGAGCGCA GAGGGTTCGC TGTACGTCGT GCGCAATTAC
GTACTGCCAC GGTTGGTGAA CGAGTAG
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| Protein sequence | MDFRKDINGL RAIAVIAVLL FHFHPAWLPG GFAGVDVFFV ISGYLITGII MRGLRNGSFR
LTAFYASRAR RIVPALAAVC LALLLAGWFY LLPLDYSALG THVASSLGFV SNIVYWREAG
YFTASAHEKW LLHTWSLSVE WQFYLLYPIA LLMLSHFVAL HNLRWWVLGG CLTGFIFCVF
ASSQWPEAAF YLLPTRAWEL LSGGVACLFP FQLRALQQRV LEQVGLAMIV VGFFALSVQD
TWPGYLVLLP VLGTFAVIAA ARNDSLLTCN PLSQWTGKLS YSLYLWHWPV VVWMSYAGWL
GELRNVSLGI GVALMLALAS WRLIEQPFGT RQPARPWRFA PLGTLIVLVF TGGALVSATQ
GVISPVRPIS LSDKAHFIQE YVDRQHNLYE PYWLKCDAFS AQTQRGQTDI DEACTRKQGT
GGVFLWGDSH AQALSLGLRT LLARTTPFYQ VASASCLPSL SDHDGRASAT SRACDYSNRT
ALQGIERLHP DIVVIAQKDS HDKTDWNRIA ARLKRLGVKH IVLIGPLPSW NPSLPSVIAN
RHWGLTESYI SDPALDQNVM AVDQATRELA ASAGIQFVSL IDKLCIADAC RVRPENSTSL
LQIDSGHLSA EGSLYVVRNY VLPRLVNE
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