Gene PSPTO_5545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5545 
Symbol 
ID1187237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp6315100 
End bp6316401 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content61% 
IMG OID637396864 
Producthypothetical protein 
Protein accessionNP_795269 
Protein GI28872650 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGTTCA ATCCTGCGAG CAGTGCCGAC GCCAGGTCGT CGATGATTTC CTTTGATACA 
TCCACTGCAG TGACATGGGT CGCTATCAGC CTGATGCTGG TCGAGACGTT TTCAGGTGCC
CTGCGCTTCT ATTTCGATCA GGCCGGCATC AGCCCCCTGC TCTATCTGCC CAAAGCCGCC
TGCATCCTGT TGTTCATCCT CGAACTGCGC ACGTTCAAGG CCGGGCGGCT GTTCTGGGCG
TTCATGATTC TATGGCTGAT CTCAGGCCTG CTGGCGATGC TCCATCGCGC CAGTATCCAC
AACCTGGCGT TCAGTCTGTT TGCCTTGAGC CCGCTGCTGT TCGGGCTGGT CTGCGGCAAG
CACCTGCTGC ATCGCCGCAC GCTGTTGCAA TGGGCGATCG GTTTTTGCCT GCTGGCCTCG
CTGCTGGGCG TGGCTCTGGA CACATCAACG TCAGTGCCGT GGAAAGGCTA CAGCTACACC
CTCGGTGAAA CCGAGCTGAG CGCCAACACC ACATGGAGCG ACGACCAGGT GGACCGCATT
GCCGGGTTTG CCAGGGTGTC CAACGTGCTG TCGATCATGA TCGCCTTCTA CGCGCTGTAC
CTGCTCATGT TCCTGCGCTC GCGTCTGCTG AGGGTATTGC TGAGCGTGGT GGCGCTTTAC
GCTATCGTGC TGACCACCAG TAAAGCGCCG GCCGCAGCAT TTGCCCTGAC CATCGGCCTG
TTGCTGATCC AGCGAATGAG CTGGACCTGC AGGACGCTCT GCGTGCTGGT GGTGTGCATC
GGTTTGCTGC TGCCGACGCT GGGTCTGATC TTGAGTCCTG ATGCCCACAC CGTGAGCAGC
GGCGGCTCGC TGGCCTCGCT TTACGACCGG CTGATCAACA CCTGGCCCAC GCTGATCGAC
GCCATGAGCC GTGAAGGCTG GATGATCAGC GGGGCAGGCT TCGGCATGGT CGGCAGCACG
ATGGCCATCT TCCCGGTACA AGGTAGCGGC GTATTTTTAG GCATGGACAG CTCCGCCCTG
TACCTGTGGG CGATGCTGGG CGTGGTCGGA CTGCTCTTGT ATGGGCTGCA GATTCCGCTG
CTTTTCAGAC TGCTCGATGA CCCGACCCGC GTCGGCCGCA TGCTGCTGGC CATCAGTTTT
TGCTGGTGCC TGATCAGTTG GACCACCGAC ATGTTCGAGG TTGCGGTCGC CAACCTGTTT
GTCGGTCTGG CGATTGGCTA TGCCATTGCC CGCAGTAAAG CAGTCGCCTC ACAAGGCCAC
TCTCCCGCGC TGCAGTTGAT CACGCATGCG GAGCCACGCT GA
 
Protein sequence
MAFNPASSAD ARSSMISFDT STAVTWVAIS LMLVETFSGA LRFYFDQAGI SPLLYLPKAA 
CILLFILELR TFKAGRLFWA FMILWLISGL LAMLHRASIH NLAFSLFALS PLLFGLVCGK
HLLHRRTLLQ WAIGFCLLAS LLGVALDTST SVPWKGYSYT LGETELSANT TWSDDQVDRI
AGFARVSNVL SIMIAFYALY LLMFLRSRLL RVLLSVVALY AIVLTTSKAP AAAFALTIGL
LLIQRMSWTC RTLCVLVVCI GLLLPTLGLI LSPDAHTVSS GGSLASLYDR LINTWPTLID
AMSREGWMIS GAGFGMVGST MAIFPVQGSG VFLGMDSSAL YLWAMLGVVG LLLYGLQIPL
LFRLLDDPTR VGRMLLAISF CWCLISWTTD MFEVAVANLF VGLAIGYAIA RSKAVASQGH
SPALQLITHA EPR