Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_5545 |
Symbol | |
ID | 1187237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 6315100 |
End bp | 6316401 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637396864 |
Product | hypothetical protein |
Protein accession | NP_795269 |
Protein GI | 28872650 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGTTCA ATCCTGCGAG CAGTGCCGAC GCCAGGTCGT CGATGATTTC CTTTGATACA TCCACTGCAG TGACATGGGT CGCTATCAGC CTGATGCTGG TCGAGACGTT TTCAGGTGCC CTGCGCTTCT ATTTCGATCA GGCCGGCATC AGCCCCCTGC TCTATCTGCC CAAAGCCGCC TGCATCCTGT TGTTCATCCT CGAACTGCGC ACGTTCAAGG CCGGGCGGCT GTTCTGGGCG TTCATGATTC TATGGCTGAT CTCAGGCCTG CTGGCGATGC TCCATCGCGC CAGTATCCAC AACCTGGCGT TCAGTCTGTT TGCCTTGAGC CCGCTGCTGT TCGGGCTGGT CTGCGGCAAG CACCTGCTGC ATCGCCGCAC GCTGTTGCAA TGGGCGATCG GTTTTTGCCT GCTGGCCTCG CTGCTGGGCG TGGCTCTGGA CACATCAACG TCAGTGCCGT GGAAAGGCTA CAGCTACACC CTCGGTGAAA CCGAGCTGAG CGCCAACACC ACATGGAGCG ACGACCAGGT GGACCGCATT GCCGGGTTTG CCAGGGTGTC CAACGTGCTG TCGATCATGA TCGCCTTCTA CGCGCTGTAC CTGCTCATGT TCCTGCGCTC GCGTCTGCTG AGGGTATTGC TGAGCGTGGT GGCGCTTTAC GCTATCGTGC TGACCACCAG TAAAGCGCCG GCCGCAGCAT TTGCCCTGAC CATCGGCCTG TTGCTGATCC AGCGAATGAG CTGGACCTGC AGGACGCTCT GCGTGCTGGT GGTGTGCATC GGTTTGCTGC TGCCGACGCT GGGTCTGATC TTGAGTCCTG ATGCCCACAC CGTGAGCAGC GGCGGCTCGC TGGCCTCGCT TTACGACCGG CTGATCAACA CCTGGCCCAC GCTGATCGAC GCCATGAGCC GTGAAGGCTG GATGATCAGC GGGGCAGGCT TCGGCATGGT CGGCAGCACG ATGGCCATCT TCCCGGTACA AGGTAGCGGC GTATTTTTAG GCATGGACAG CTCCGCCCTG TACCTGTGGG CGATGCTGGG CGTGGTCGGA CTGCTCTTGT ATGGGCTGCA GATTCCGCTG CTTTTCAGAC TGCTCGATGA CCCGACCCGC GTCGGCCGCA TGCTGCTGGC CATCAGTTTT TGCTGGTGCC TGATCAGTTG GACCACCGAC ATGTTCGAGG TTGCGGTCGC CAACCTGTTT GTCGGTCTGG CGATTGGCTA TGCCATTGCC CGCAGTAAAG CAGTCGCCTC ACAAGGCCAC TCTCCCGCGC TGCAGTTGAT CACGCATGCG GAGCCACGCT GA
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Protein sequence | MAFNPASSAD ARSSMISFDT STAVTWVAIS LMLVETFSGA LRFYFDQAGI SPLLYLPKAA CILLFILELR TFKAGRLFWA FMILWLISGL LAMLHRASIH NLAFSLFALS PLLFGLVCGK HLLHRRTLLQ WAIGFCLLAS LLGVALDTST SVPWKGYSYT LGETELSANT TWSDDQVDRI AGFARVSNVL SIMIAFYALY LLMFLRSRLL RVLLSVVALY AIVLTTSKAP AAAFALTIGL LLIQRMSWTC RTLCVLVVCI GLLLPTLGLI LSPDAHTVSS GGSLASLYDR LINTWPTLID AMSREGWMIS GAGFGMVGST MAIFPVQGSG VFLGMDSSAL YLWAMLGVVG LLLYGLQIPL LFRLLDDPTR VGRMLLAISF CWCLISWTTD MFEVAVANLF VGLAIGYAIA RSKAVASQGH SPALQLITHA EPR
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