| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5519 |
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| Symbol | |
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| ID | 1187211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 6285870 |
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| End bp | 6287633 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637396838 |
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| Product | sodium/hydrogen exchanger family protein |
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| Protein accession | NP_795243 |
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| Protein GI | 28872624 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0475] Kef-type K+ transport systems, membrane components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATGCCA TCAATTTCAT TCAAGACCTG GCAGTGATCA TGCTGGTGGC GGGCGTAGTG
ACCATTCTCT TTCATCGCCT TCGTCAGCCC GTGGTACTCG GTTATATCGT CGCCGGCTTC
ATCATCGGCC CGCACACGCC ACCGGTCAGC CTGATCCACG ATGAGGACAC CATCAAGATC
CTGGCCGAGC TGGGGGTGAT CTTCCTGATG TTCTGCCTGG GGCTGGAGTT CAGCCTGCGC
AAGCTGTTCA AGGTCGGGGC CACAGCGTTC ATCGCCGCGT TCCTCGAAAT TGCCCTGATG
ATCTGGATTG GTTACGAGAT CGGTCAGTTC TTCGGCTGGA AAACCATGGA CTCGCTATTT
CTCGGCGCGA TTTTGGCGAT CTCCTCGACC ACCATCATCG TCAAGGCGCT CAACGACCTG
AAGATGAAGA ACCAGCATTT CGCCCAGTTG ATCTTCGGCG TGCTGATCGT CGAAGACATT
CTGGGCATCG GCATTATCGC GCTGCTGTCG GGCATTGCGG TCAGTGGTTC GGTCAGTTCG
GGCGAAGTGT TCTCAACGGT CGGCAAGCTG TCTCTGTTCA TGATTGTGGC GCTGGTCGTC
GGTATTCTGC TGGTGCCGCG ATTGCTGTCC TACGTCGCCA GGTTCGACAG CAACGAGATG
CTGCTGATTA CCGTGCTGGG CTTGTGCTTC GGCTTCTGCC TGCTGGTGGT CAAGCTGGAA
TACAGCATGG TATTGGGCGC GTTCCTGATC GGCGCGATCA TGGCCGAGTC GCGAGAGCTG
CTGAAGATCG AACGGTTGAT CGAACCCATC CGGGACATGT TCAGTGCGAT CTTCTTTGTC
GCCATCGGCT TGATGATCGA TCCGAAAATC CTTCTGGAAT ATGCCTGGCC GATTGCAGTC
ATCACTGTCG CGGTGGTGTT GGGCAAGATG ATTTCCTGCG GCCTTGGCGC GTTTATCGCC
GGCAATGACG GCCGTACCTC ACTGCGTGTG GGCATGGGGC TGTCACAGAT TGGCGAGTTT
TCCTTCATCA TCGCGGCGCT GGGCATGACC CTGCAGGTCA CCAGCGATTT CCTGTACCCG
GTGGCCGTCG CTGTATCGGC AATCACCACG TTGCTGACGC CCTACCTTAT TCGCGGCGCT
GATCCGTTGT CGCTCAAGCT GGCCGCAATA ATGCCCCGGC GCGTGGCGCG GGTGTTCGGC
ATGTACGGTG AATGGCTGCG CAGCATTCAG CCGCAAGGGC AGAGCGCAGT GCTCGCCGGG
ATGATCAGGC GGATTCTGCT GCAGGTTGGT GTCAACCTGG CGCTGGTGAT GGCGATCTTT
TTCAGCGGTG GCTACTTCGC GGAACGTCTT GGCGGGTACA TGGACGAGTG GGTGGCAGAT
GTCAGCCATC AGAAAGCCTG GATCTGCGGT GCGGCATTGC TGCTGTCGCT GCCGTTCCTG
ATTGCGGCGT ACCGCAAGCT CAAGGCGCTG TCGATGTTGC TGGCAGAGAT GGGCGTCAAG
CCCGAGATGG CCGGCCGACA TACCGTGCGT GTGCGCAAGG TCGTGGCGGA GGTGATTCCG
TTGTTGTCGC TGGTGGTGAT CTTTGTGATG CTGGCGGCGT TGTCGGCCAG TATTCTGCCG
GCCAACGAAT TGCTGCTGGT CGTTGTTCTG GTGGCTGCGC TGGTCGCCGC TTTGCTGTGG
CGCTGGCTGA TCCGCGTGCA TACGCGGATG CAGATCGCGC TGCTGGAGAC GCTGGGGAAT
AATCAGGAAT CATCCGGGCA TTGA
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| Protein sequence | MHAINFIQDL AVIMLVAGVV TILFHRLRQP VVLGYIVAGF IIGPHTPPVS LIHDEDTIKI
LAELGVIFLM FCLGLEFSLR KLFKVGATAF IAAFLEIALM IWIGYEIGQF FGWKTMDSLF
LGAILAISST TIIVKALNDL KMKNQHFAQL IFGVLIVEDI LGIGIIALLS GIAVSGSVSS
GEVFSTVGKL SLFMIVALVV GILLVPRLLS YVARFDSNEM LLITVLGLCF GFCLLVVKLE
YSMVLGAFLI GAIMAESREL LKIERLIEPI RDMFSAIFFV AIGLMIDPKI LLEYAWPIAV
ITVAVVLGKM ISCGLGAFIA GNDGRTSLRV GMGLSQIGEF SFIIAALGMT LQVTSDFLYP
VAVAVSAITT LLTPYLIRGA DPLSLKLAAI MPRRVARVFG MYGEWLRSIQ PQGQSAVLAG
MIRRILLQVG VNLALVMAIF FSGGYFAERL GGYMDEWVAD VSHQKAWICG AALLLSLPFL
IAAYRKLKAL SMLLAEMGVK PEMAGRHTVR VRKVVAEVIP LLSLVVIFVM LAALSASILP
ANELLLVVVL VAALVAALLW RWLIRVHTRM QIALLETLGN NQESSGH
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