Gene PSPTO_5510 details

Gene Information

• Locus tag: PSPTO_5510
• Symbol: oadA
• ID: 1187202
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: -
• Start bp: 6275563
• End bp: 6277371
• Gene Length: 1809 bp
• Protein Length: 602 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637396829
• Product: oxaloacetate decarboxylase, alpha subunit
• Protein accession: NP_795234
• Protein GI: 28872615
• COG category: [C] Energy production and conversion; [I] Lipid transport and metabolism
• COG ID: [COG0511] Biotin carboxyl carrier protein; [COG5016] Pyruvate/oxaloacetate carboxyltransferase
• TIGRFAM ID: [TIGR01108] oxaloacetate decarboxylase alpha subunit

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCAAGA AGATATTCGT AACCGACACC ATCCTGCGCG ACGCTCACCA ATCGCTGCTG 
GCGACCCGCA TGCGCACCGA GGACATGCTG CCAATCTGCG ACAAGCTCGA CAAGGTCGGC 
TATTGGTCGC TGGAAATGTG GGGTGGCGCG ACGTTTGACG CCTGCGTGCG TTTTCTCAAG 
GAAGACCCTT GGGAGCGTCT GCGTCAGTTG CGTGCGGCTT TGCCCAATAC CCGTCTGCAA 
ATGCTTCTAC GCGGTCAGAA CCTGCTGGGC TATCGGCATT ACAGCGATGA CGTGGTCAAG 
GCGTTCGTGG CCAAGGCGGC GGTGAATGGC ATCGACGTGT TCCGTATTTT CGATGCCATG 
AACGATGTGC GTAACCTGCG CGTTGCCATC GAAGCGGTGA AGGCGGCAGG CAAGCATGCG 
CAGGGTACCA TCGCCTACAC CACCAGCCCG GTGCACACCA TCGAAGCGTT CGTCGCGCAG 
GCCCGGCAAA TGGAGGCGAT GGGCTGCGAC TCGGTGGCGA TCAAGGACAT GGCCGGTCTG 
TTGACGCCGT ATGCCACCGG CGAGCTGGTC AGGGCGCTGA AAGCCGAGCA GTCGTTGCCG 
GTGTTCATTC ACTCCCATGA CACGGCGGGT CTGGCTGCGA TGTGTCAGCT CAAGGCCATC 
GAAAGCGGCG CGGACCATAT CGACACCGCC ATCTCCAGCT TCGCCTGGGG CACCAGCCAT 
CCAGGCACCG AGTCGATGGT TGCGGCGCTC AAGGGCAGCG AGTTCGACAC CGGGCTGGAC 
CTGGAGCTGT TGCAGGAAAT CGGTTTGTAT TTCTACGCAG TGCGTAAGAA ATACCACCAG 
TTCGAGAGCG AATTCACGGC AGTCGATACC CGCGTGCAGG TCAATCAGGT GCCTGGCGGG 
ATGATTTCCA ACCTCGCCAA CCAGCTCAAG GAGCAGGGCG CGCTCAATCG CATGAGCGAA 
GTACTGGCGG AAATCCCGCG CGTGCGCAAA GACCTGGGTT ATCCACCGCT GGTCACACCG 
ACTTCACAGA TTGTCGGCAC CCAGGCGTTT TTCAACGTGC TGGCTGGCGA GCGTTACAAG 
ACCATCACCA ATGAGGTGAA GCTTTACCTG CAAGGCGGGT ATGGCAAAGC GCCGGGGCAA 
GTGGATGAAA AACTGCGTCG GCAGGCGATT GGCAGCGAGG ACCTGATCGA TGTTCGTCCG 
GCCGACCTGC TCAAGCCGGA GATGACCAAG CTGCGTGCTG ACATTGGCGC ACTGGCCAAA 
TCCGAAGAGG ACGTGCTGAC CTTTGCCATG TTTCCGGACA TTGGCCGCAA GTTTCTTGAA 
GAGCGCGCCG CCGGGACCCT GACGCCGGAA GTGTTGCTGC CGATCCCCGA AGCCGGAAGC 
GTGGCCAAAG CAGGCGGCGA GGGTGTGCCG ACCGAGTTCG TGATTGATGT GCATGGCGAG 
ACCTACCGGG TGGACATCAC CGGCGTGGGC GTCAAGGCCG AGGGCAAGCG CCACTTCTAC 
CTGACCATCG ACGGCATGCC GGAAGAAGTG GTGTTCGAGC CGCTCAACGA ATTTGTCGGC 
GGCGGCGCGA GCAAACGCCA GCAGGCCAGC GCGCCGGGCC ACGTCAGTAC CACCATGCCG 
GGCAACATCG TCGATGTGCT GGTCAAGGAA GGCGATGTGG TGAAGGCCGG TCAGGCCGTG 
CTGATTACTG AAGCGATGAA GATGGAAACC GAAGTTCAGG CATCCATTGC CGGCAAGGTC 
GTGGCGATCC ACGTTGCCAA GGGCGACCGC GTCAACCCGG GCGAGATACT GGTCGAGATC 
GAAGGCTGA 

 

Protein sequence

MTKKIFVTDT ILRDAHQSLL ATRMRTEDML PICDKLDKVG YWSLEMWGGA TFDACVRFLK 
EDPWERLRQL RAALPNTRLQ MLLRGQNLLG YRHYSDDVVK AFVAKAAVNG IDVFRIFDAM 
NDVRNLRVAI EAVKAAGKHA QGTIAYTTSP VHTIEAFVAQ ARQMEAMGCD SVAIKDMAGL 
LTPYATGELV RALKAEQSLP VFIHSHDTAG LAAMCQLKAI ESGADHIDTA ISSFAWGTSH 
PGTESMVAAL KGSEFDTGLD LELLQEIGLY FYAVRKKYHQ FESEFTAVDT RVQVNQVPGG 
MISNLANQLK EQGALNRMSE VLAEIPRVRK DLGYPPLVTP TSQIVGTQAF FNVLAGERYK 
TITNEVKLYL QGGYGKAPGQ VDEKLRRQAI GSEDLIDVRP ADLLKPEMTK LRADIGALAK 
SEEDVLTFAM FPDIGRKFLE ERAAGTLTPE VLLPIPEAGS VAKAGGEGVP TEFVIDVHGE 
TYRVDITGVG VKAEGKRHFY LTIDGMPEEV VFEPLNEFVG GGASKRQQAS APGHVSTTMP 
GNIVDVLVKE GDVVKAGQAV LITEAMKMET EVQASIAGKV VAIHVAKGDR VNPGEILVEI 
EG