Gene PSPTO_5506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5506 
Symbol 
ID1187198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp6272435 
End bp6272881 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content60% 
IMG OID637396825 
Productacetyltransferase, GNAT family 
Protein accessionNP_795230 
Protein GI28872611 
COG category[R] General function prediction only 
COG ID[COG0456] Acetyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGACG TCCGGATTCG CCCCGTCGCT GCCGACGATC ATCAGGCCTG GCTGCCGTTA 
TGGCAGGCCT ATCTGAGTTT TTACAAGACC GAGCTGCCCG AAGGCGTGAG CGAGATCACC
TGGCAACGCT TTCTCGACCC CAGCGAGCCG ACTCATTCGG CACTGGCCTG GCTGGATGGC
AAGGCGGTGG GCATGGTGAA CTTCATCTAT CATCGCTCCA ACTGGAGCAT CAACAACGCC
TGTTACCTGC AAGACCTGAT CGTCACCCCC GAGCAGCGCG GGACGGGCGT AGGCCGGCAG
TTGATCGAGT TTGTCTACGC CACGGCCAGG GCCGATGGCT GCGACAAGGT GCACTGGCTG
ACCCATGAAA CCAACGCCAC GGCCATCCGG TTGTATGGGC GGATTGCTGA TCGCGGCGGG
TACATCCAAT TTCGTAAAGC ACTCTGA
 
Protein sequence
MTDVRIRPVA ADDHQAWLPL WQAYLSFYKT ELPEGVSEIT WQRFLDPSEP THSALAWLDG 
KAVGMVNFIY HRSNWSINNA CYLQDLIVTP EQRGTGVGRQ LIEFVYATAR ADGCDKVHWL
THETNATAIR LYGRIADRGG YIQFRKAL