| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5502 |
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| Symbol | |
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| ID | 1187194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 6267861 |
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| End bp | 6268748 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637396821 |
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| Product | hypothetical protein |
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| Protein accession | NP_795226 |
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| Protein GI | 28872607 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3781] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCAGCAAA CGATCATGTC AAAAGTCCGT TTTCTCGGCA AAACCATTGG TTACGTCGGT
TGGTCGCTGT TCTGGCTGCT GATCTGGGAC GTGATCGTCA CCGTCGATTT CATGCTGTTT
CTCGATCGCA AGATCAACCT GCCATCGTTG CCGCTGACCT TGCTCGGTTC GGCGCTGGTG
GTGCTGACCA GCTTTCGCAA TTCCAGCGCT TACAATCGCT GGTGGGAGGC GCGCACGCTG
TGGGGCGCGA TGGTCAACAG CTCACGCAGC TTCGCCCGTC AGGTTCTGAC GCTGGTCGAA
GACGACAACG GCATCAACCC GGTCAAGGCC ATCTTGTTGC GTCGCCATGT GGCCTACGTG
AAGTGCCTGT CCGCGCACTT GAAGGGCGTT GAACCGGGCG ACGAGATTCA GATGCTGATC
CCCCGCGAGG AATTTGAACG CCGTCGCGAT ACCAACAACT TCCCCAACGA CCTGCTCAAC
ACCTCGGCTG CACTGCTGGC CAAGGAGTAT CAGGCAGGGC GTCTGGACAG TATTCGTCTG
GCGCGTCTGG AGTCGACCAT GGTCGATCTC TCCAACTGCC AAGGCGGCAT GGAGCGGATC
GCCAACACGC CTTTGCCTTA TCCGTATGTG GCCTTCCCGA GGCTGTTCAT CACGCTGTTC
TGCCTGATCG TCCCGATTGG TCTGGTGGAA ACCCTGGGCT GGTTCACGCC GCTGGCCTCC
ACCGTGGTGG GCTTCATGCT GCTGGCCATC GAGAAGATCG GCACCGACCT GCAGAGCCCG
TTCCGTGCCA GTGAGCACGT GATTCAGATG AATGCGTTGT GCGAAAACAT CGAGCGCAAT
CTGGATTCGA TGCTCAGGGG CGCGCAGGAA GAAAGCAAAG CGTCGTAA
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| Protein sequence | MQQTIMSKVR FLGKTIGYVG WSLFWLLIWD VIVTVDFMLF LDRKINLPSL PLTLLGSALV
VLTSFRNSSA YNRWWEARTL WGAMVNSSRS FARQVLTLVE DDNGINPVKA ILLRRHVAYV
KCLSAHLKGV EPGDEIQMLI PREEFERRRD TNNFPNDLLN TSAALLAKEY QAGRLDSIRL
ARLESTMVDL SNCQGGMERI ANTPLPYPYV AFPRLFITLF CLIVPIGLVE TLGWFTPLAS
TVVGFMLLAI EKIGTDLQSP FRASEHVIQM NALCENIERN LDSMLRGAQE ESKAS
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