Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_5478 |
Symbol | phoR |
ID | 1187170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 6237744 |
End bp | 6239066 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637396797 |
Product | phosphate regulon sensor protein phoR |
Protein accession | NP_795202 |
Protein GI | 28872583 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5002] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR02966] phosphate regulon sensor kinase PhoR |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAATCAAA ATTGGTACGG CACCCTGATA CGCCACATGT TGCTGCTGGT CACCGCCTGC CTGTTGGTGG GCCTGATCAG CGGACACTAT GGCTGGAGCC TGGCCACCGG TCTGGGCCTG TATCTGGCCT GGACCCTCAA ACAATTACTG CGCCTGCATG ACTGGCTGAG CAGCCACAAG GCCGACGAGC CACCTCCAGA CGGTTACGGC CTATGGGGCG AAGTGTTCGA CAGCATCTAC CACCTGCAAC GCCGTGACCA ACGGGTGCGT GGCCGCTTGC AGGCCGTCAT CGACCGCGTG CAGGAATCCA CCGCTGCTCT GCGCGATGCG GTGATCATGC TCGACAGCGA AGGCAATCTG GAGTGGTGGA ACCGCGCCGC CGAAACCTTG CTGGGCCTCA AGACGCCGCA GGACAGTGGC CAGCCCGTGA CCAATCTGGT GCGCCATCCA CGCTTCAAGG AATACTTTGC GCTGGGCGAC TACAGCGAGC CGCTGGAGAT CTCCTCGCCC ACCAACGACC GCATGCGCAT TCAGTTGCTG ATTACCCGCT ATGGCAACAA CGAGCATCTG ATGCTGGTAC GTGACGTCAC ACGCATTCAT CTGCTGGAGC AGATGCGCAA AGACTTCGTC GCCAACGTAT CCCATGAATT ACGCACGCCG CTGACCGTGA TCTTCGGCTA CCTGGAAACA CTGCTCGACA ACGTGGAAGA GGTGAACCCA CGCTGGGTGC GGGCACTGCA ACAGATGCAT CAACAAGGCG GGCGCATGCA GACGCTGCTC AACGACCTGC TGTTGCTGGC CAAGCTCGAA GCCACGGATT ACCCTTCGGA CAACAATCCG GTCGTGGTCA CTGCGCTGCT CAAGACCATT ACCGCCGACG CCAATGCGCT GTCGGGCAGC AAGAATCAAC AGATCCACCT CAGCCTTGAA AGCGACATGC TCCTCAAAGG CAGCGAAAGC GAGCTGCGCA GCGCGTTTTC CAACCTGATT TTCAACGCGG TCAAGTACAC CCTGGCCGAA GGCGTTATCC GCATACGCTG GTGGAACGAC GAACGGGGCG CGCACCTTAG CGTGCAGGAT TCGGGCATCG GCATCGAGAC CAAACATCTG CCACGCCTGA CAGAACGCTT CTACAGGGTC GATACCAGCC GGGCGTCCAA TACCGGTGGC ACGGGGCTGG GCCTGGCGAT CGTCAAACAC GTGTTGCTGC GCCATCGCGG CCACCTTGAG ATCAATAGCG TTCCGGGCAA GGGCAGCGTT TTTACTTGCC ACTTTGCCGA CGACCAATTG TCCAAACCCT TGAACGACGA TTCAGACTAC TAG
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Protein sequence | MNQNWYGTLI RHMLLLVTAC LLVGLISGHY GWSLATGLGL YLAWTLKQLL RLHDWLSSHK ADEPPPDGYG LWGEVFDSIY HLQRRDQRVR GRLQAVIDRV QESTAALRDA VIMLDSEGNL EWWNRAAETL LGLKTPQDSG QPVTNLVRHP RFKEYFALGD YSEPLEISSP TNDRMRIQLL ITRYGNNEHL MLVRDVTRIH LLEQMRKDFV ANVSHELRTP LTVIFGYLET LLDNVEEVNP RWVRALQQMH QQGGRMQTLL NDLLLLAKLE ATDYPSDNNP VVVTALLKTI TADANALSGS KNQQIHLSLE SDMLLKGSES ELRSAFSNLI FNAVKYTLAE GVIRIRWWND ERGAHLSVQD SGIGIETKHL PRLTERFYRV DTSRASNTGG TGLGLAIVKH VLLRHRGHLE INSVPGKGSV FTCHFADDQL SKPLNDDSDY
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