| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5458 |
|---|
| Symbol | |
|---|
| ID | 1187145 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 6213036 |
|---|
| End bp | 6213512 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637396773 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_795183 |
|---|
| Protein GI | 28872564 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCATA TTCACATTGA TTTAAAGCCC GACACACTGA TCAACAACCC GACGATGTGC
CGCGTTGTAT CGGCTGTAGA GGTTTGCGGC GATGCCAATA GTGTGTGGGC TATCGTGGGC
AATTTTGGCG GTTTTCAAGC ATTTATTCCG GCATTGGAGA GCACTGAAGT CACCGGCAAA
GGTCCTCGCT CAGTGCGCAA GAAGCTGTTC AAGGATGGCA ATGTGGCGAT CGAGCAGTTG
AATTCCCAGG ATGATCACGC GCATTACATG ACCTGGTCAT TGATACATAC CAGCTTGCCG
GTCAATAACC TGTGGGCTGC GATGGCGGTT GAGGCTACCG GTGACAACAC GTGTGTCGCC
AGTTGGACAA TCGTTGCAGA CCCTGTTCAG GGTGGGCCTG AGGGGGACGC GTTTGAAGGG
TTTCTTCAGG GGTTTGCTGA CGGTGCGATG AGTAACGTGC GCAGCCTGTT TGGCTGA
|
|---|
| Protein sequence | MNHIHIDLKP DTLINNPTMC RVVSAVEVCG DANSVWAIVG NFGGFQAFIP ALESTEVTGK
GPRSVRKKLF KDGNVAIEQL NSQDDHAHYM TWSLIHTSLP VNNLWAAMAV EATGDNTCVA
SWTIVADPVQ GGPEGDAFEG FLQGFADGAM SNVRSLFG
|
|---|
| |