| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5431 |
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| Symbol | |
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| ID | 1187118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 6176297 |
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| End bp | 6176704 |
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| Gene Length | 408 bp |
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| Protein Length | 135 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637396748 |
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| Product | hypothetical protein |
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| Protein accession | NP_795158 |
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| Protein GI | 28872539 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3518] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03357] type VI secretion system lysozyme-related protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTGGAT ACGGCAGCCT TTTCGAACGC CTCAATGGCG ATGCGGAAAA ACGCGTCAGC
TGGAGCCGCG AGGTTTCAGC CACGGCCTCC GTGGCTGCCC ATCTGGCCAA GATGCTCAGC
ACCCGTGCGG GCAGCGTGCA AACGCTGTCC GACTACGGGC TACCCGATCT CAATGACATG
CGCCTGAGCC TGCACGACTC GCTGACTCAG GCCCGTTTGG CCATCGAAAG CTTCATCGAA
GCCTACGAGC CGCGCTTGAG CAATGTGCGT GTCATTTCCC TGCCGCGTGA TCACGATCAG
CTTCGCCTGT CCTTCAGCAT TGAAGGCCTG CTGGAAGTCG AGGGTTTCAA GCGTCAGGTC
AGTTTCGCCG CTCGCCTGGA TGGTAGCGGT CAAGTGAAGG TTAATTAA
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| Protein sequence | MTGYGSLFER LNGDAEKRVS WSREVSATAS VAAHLAKMLS TRAGSVQTLS DYGLPDLNDM
RLSLHDSLTQ ARLAIESFIE AYEPRLSNVR VISLPRDHDQ LRLSFSIEGL LEVEGFKRQV
SFAARLDGSG QVKVN
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