| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5398 |
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| Symbol | |
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| ID | 1187085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 6130322 |
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| End bp | 6132130 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637396715 |
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| Product | sensor histidine kinase |
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| Protein accession | NP_795125 |
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| Protein GI | 28872506 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCCCG CTCTGCCGCC CCGCCCACGC TGGCGCAGCC TTGCCCTGCT GGCGCTGTGC
CTGGCGCCGT TATTGTGGCC GCTTGAGCAT CTGGCCGAGC GTTATTACCG CAGCGTATTG
GCCAATCAGA ATCGCCAGAC CCTGGACCTG TACGTCGCCA ACCTGCTCGG CACCCTGCAC
CGTTATGAAA CCCTGCCGCA GATTCTCGGC GACCTGCCAG CCTTGCGCGG CGCACTGGTT
GCACCGCATG ACAGCGAGAC GCTGAAAAAC GCCAATCGCC TGCTCAGCGA CATAACGCGC
CAGACCGGCG CCGATGTCAT GTACCTGATG GACGCCAACG GCCTGACACT TGCCGCTTCC
AATTCAGAGC ATAAAGACAG CTTCATTGGC CGCAACTTCT CGTTTCGTCC GTACTTCATC
GATGCGCTGG CGGGCAGAAC CGGCCGTTTC TTCGGTCTGG GCACCACCTC GGCCAAGCGG
GGCTACTTCT TTGCCGGGCC GGTACGCGAT GGCGAGCGGG TGATCGGCGT GCTGGTGGTC
AAGGTCGATC TGGACCACAC CGAAACCCTG TGGGGCAAGA CCCCCGAGCA ACTGTTACTG
ACCGATCAGA GTGGCGTGGT GATCCTCACC TCCAACCCGG AATGGCGGTT TCGGGCGACC
CGCGATCTGA CCGATGACGA GAAAAAGGCC ATTGTCGCGA TCCAGTCCTA CCCGACCCGC
GATCCTCGCC CGTTGAGGAT TGACGAGCAC GCCTGGCTGG CCCAGACCCA GGCTATCGAG
GAGACGGGCT GGAACGTGAA TATTCTGGCG CCCCGCTCGC TGGTTGATCG CCAGGTACGC
ACGGTGGTGG CAATTGGCGG CGCGGCGCTG CTGGTGTTGA TGCTGCTGCT GGGCTTGATG
ATGCAGCGTC GTCGTCACTA CCTGGACCGC ATCGCCTTCG AGGCCAAGGC GCGGCGCGAG
CTGGAAATGC GCGTGATCGA GCGCACCAGC GATCTGGAAG GCCTCAACAG CCGACTGCGC
CAGGAAGTGC TGGAGCGTGA ACAGGCGCAG CAGGAACTGG TGCAGGCCCA GGACGAACTG
GTCCAGACCA GCAAACTGAC CGCGCTGGGC ACCATGTCGG CGAGCATCAG CCACGAATTG
AATCAGCCGT TGGCCGCGAT CCGCAGTTAT GCGGAGAACG CCGAAGTGCT GCTTGATCAT
CAGCGTACCG AAGAGGCGCG CGGCAACCTC AAACTGATCA GCGAACTGAC CGGGCGCATG
GCCTCGATCA TCGCTCATTT GCGCGCCTTC GCCCGACGTG ACCGTCATGC GCCTGAAAGT
GTGGCACTGC AGCCGGCGCT GGACGACGCG CTGGCATTGC TGACCAAACG CCGTCGCGCG
ATGGAAGTCG AACTGATTCG TGACCTGCCC GACGCGACGC TGTGGGTGCA GGCCGGTGAA
ACGCGTCTGC GTCAGGTGCT CGGCAATCTG CTGGCCAACG CGCTGGACGC CCTCACCGAA
AAAGGCCCGC CGCGCCGGCT GTGGATAAGT GCCGAGCAAA CCGCCGACGG CGTCAACCTG
TACATTCGTG ACAACGGTCC CGGGTTTTCT CAGGAAGCAC TGGCGCGGGC CCGCGAGCCA
TTCTTCACTA CCAAGACCCG CACCCAGGGC CTTGGGCTTG GGCTGGCGAT CTGCGACACG
CTGATGCGCG CGCTGGGCGG CGAGTTACTG TTCGCCAACC ACCCGAGCGG CGGCGCAGTG
CTTACCCTGC GCCTGCGTGC CGGTGCTTCA GGGGCCAATC TTCAACCGCC AGAGGACCTT
TCCGCATGA
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| Protein sequence | MTPALPPRPR WRSLALLALC LAPLLWPLEH LAERYYRSVL ANQNRQTLDL YVANLLGTLH
RYETLPQILG DLPALRGALV APHDSETLKN ANRLLSDITR QTGADVMYLM DANGLTLAAS
NSEHKDSFIG RNFSFRPYFI DALAGRTGRF FGLGTTSAKR GYFFAGPVRD GERVIGVLVV
KVDLDHTETL WGKTPEQLLL TDQSGVVILT SNPEWRFRAT RDLTDDEKKA IVAIQSYPTR
DPRPLRIDEH AWLAQTQAIE ETGWNVNILA PRSLVDRQVR TVVAIGGAAL LVLMLLLGLM
MQRRRHYLDR IAFEAKARRE LEMRVIERTS DLEGLNSRLR QEVLEREQAQ QELVQAQDEL
VQTSKLTALG TMSASISHEL NQPLAAIRSY AENAEVLLDH QRTEEARGNL KLISELTGRM
ASIIAHLRAF ARRDRHAPES VALQPALDDA LALLTKRRRA MEVELIRDLP DATLWVQAGE
TRLRQVLGNL LANALDALTE KGPPRRLWIS AEQTADGVNL YIRDNGPGFS QEALARAREP
FFTTKTRTQG LGLGLAICDT LMRALGGELL FANHPSGGAV LTLRLRAGAS GANLQPPEDL
SA
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