| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5393 |
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| Symbol | |
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| ID | 1187080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 6123022 |
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| End bp | 6124128 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637396710 |
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| Product | hypothetical protein |
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| Protein accession | NP_795120 |
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| Protein GI | 28872501 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2957] Peptidylarginine deiminase and related enzymes |
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| TIGRFAM ID | [TIGR03380] agmatine deiminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACGC TCAACAGCAC GCCACGCGCC GACGGTTTTC ACATGCCAGC CGAATGGGCA
CCGCAAACCC AGGTCTGGAT GGTCTGGCCC GAGCGCCCGG ACAACTGGCG CCTGGGTGGC
AAGCCCGCCC AGGCCGCCCA CGTTGCCATC GCCAAGGCCA TCGCCCGCTT CGAGCCGGTC
ACGGTGGCAG TGTCTGCTGC GCAGTACGAC AACGCCCGTG CGCGGCTGGA CATGCCCAAC
ATTCGCGTCG TGGAAATGAG CAGCAACGAT GCCTGGGTGC GCGACAGCGG CCCGACCTTC
GTCATCAATG ACCGTGGCGA ACTGCGTGGC GTGAACTGGG AGTTCAATGC CTGGGGCGGC
TTCGATGGCG GCTTGTACGC GCCGTGGAAT CTGGACTCGC AAGTGGGCAG CAAGGTGCTG
GAAATCGAGC GTTGCCCACG TTATGCCACC CAAGGCTTCG TGCTGGAAGG CGGCTCGATC
CATGTGGATG GCGAAGGCAC ACTGATCACC ACTGAAGAGT GCTTGCTCAA TCGCAACCGT
AATCCGCACC TGACCCGCGA ACAGATCGAA GCGGTACTGA GCGACTACCT GGCTGTGGAT
AAGATCATCT GGCTGCCGGA TGGCTTGTTC AACGACGAAA CCGACGGGCA TGTGGATAAC
TTCTGCTGCT ATATCCGTCC GGGCGAAGTG TTACTGGCCT GGACCGATGA TCCCGAAGAC
CCCAACTACC CACGCTGCCA TGCCGCGTTG AGTATTTTGG AAAACACCCG TGATGCGCAG
GGTCGTGCGT TTATCGTTCA TAAAATGCCG ATTCCCGGCC CATTGTTCGC GACAGAAGAA
GAATGCGCAG GCGTCGATCA GGTGCACGGC AGCCAGGAAC GCAACCCATC GGTGCGCCTG
GCCGGCTCCT ATGTGAATTT TCTGATCGTC AACGGCGGCA TTATCGCGCC GAGTTTCGAT
GATCCGATGG ACGAAAAGGC CCGTGAAATC CTGCAAAAGC TGTTTCCGGA GCACGAAGTG
GTGATGGCAC CAGGCCGGGA GCTGCTGCTC GGCGGGGGAA ATATTCACTG CTTGACGCAG
CAACAGCCAG CCCCTTTCAA GGCCTAG
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| Protein sequence | MTTLNSTPRA DGFHMPAEWA PQTQVWMVWP ERPDNWRLGG KPAQAAHVAI AKAIARFEPV
TVAVSAAQYD NARARLDMPN IRVVEMSSND AWVRDSGPTF VINDRGELRG VNWEFNAWGG
FDGGLYAPWN LDSQVGSKVL EIERCPRYAT QGFVLEGGSI HVDGEGTLIT TEECLLNRNR
NPHLTREQIE AVLSDYLAVD KIIWLPDGLF NDETDGHVDN FCCYIRPGEV LLAWTDDPED
PNYPRCHAAL SILENTRDAQ GRAFIVHKMP IPGPLFATEE ECAGVDQVHG SQERNPSVRL
AGSYVNFLIV NGGIIAPSFD DPMDEKAREI LQKLFPEHEV VMAPGRELLL GGGNIHCLTQ
QQPAPFKA
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