Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_5377 |
Symbol | |
ID | 1187064 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 6109369 |
End bp | 6110601 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637396694 |
Product | hypothetical protein |
Protein accession | NP_795104 |
Protein GI | 28872485 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1914] Mn2+ and Fe2+ transporters of the NRAMP family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.31598 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACAACGA CCACAAAAGA GTTCACAAAG GCGCGGCGGG CGTCTTTAGT CGCCGCTGTC TTCATGATGG CCACGTCTGC CATCGGGCCT GGCTTCCTGA CCCAGACCGC TACGTTCACG GCAACATTGG GTGCTGCGTT TGCTTTCGGC ATTCTGGCTT CGATCCTGAT TGACTTCGTC GTTCAGCTGA ACGTCTGGCG CATAGTGTCG CTGACTAAAA TGCGCGCGGC CGATCTGGCC AACGCTGCTA TTCCGGGCAG TGGCTACTTG CTGACGGTGT TGGTGCTGTG CGGTGGGCTG GTGTTCATGC TGGGTAACAT TGCCGGTGCA GGTCTGGGCT TGAATGCGCT GACTGGTCTT GATCCTAAAT GGGGTGGTGC GTTGAGTGCG CTGCTTGCCA TTGGGATTTT CTCGTCTCAT CGCGCTGGCG TGGCGATGGA CCGGATCATG ATGGGGCTGG GCATCCTGAA AATATGCCTG ATCGTGTTCG CATGCTTTGC GACCCATCCT CCGCTGGGCG AAGCCCTGCG TCAGTCGGTA TGGCCTGACT ACATCGACTT TGCCTCCATC ACCACCATCG TCGGCGGCAC GGTAGGCGGT TACATCACTT ATGCCGGCGC TCACCGTCTG CTTGATCGCG GCACCGTGGG TGTAGAAAAT CTTCAGGCGG TATCACGCGC AGCGCTGACC GGTATCCTGG TCACAGGCAT TGCTCGCTAC GTATTGTTTC TGGCTATTCT GGGTGTGGTG GCAAGCGGAG TGGTTATCGA TGTGTCTGGC AAGGGCGCAA ACCCTGCTGG TCAGGCATTT CAGGCAGCGG CAGGCGACAT CGGCATGATG ATGTTCGGCC TGGTGCTGTG GGCGGCGGGT ATCAGCAGTG TAATCGGCGC GTCTTATACG TCGATGTCCT TTATCACGGT GTTCTCCAAG AAAATCACAG AGCGCGTTCG TAACCTCGCG ACCGTGGTTT TCATCGTCAT CTGCATGGCT GTCTATATCG TGCTGGGTAA GCCACCGGCA GCGTTGCTGG TGTTTGCTGG CGGTTTCAAC GGGTTGATCC TGCCGCTGGG CCTGAGCATC TTCATGTACG TGGGCTGGGC CCGGTCTGAC CTGATGGATG GCTACCACTA TCCACGCTGG TTGCTGGTGC TGGGTATTCT GACCTGCCTG CTGTCGTGGT TCATGGCCTA CAAGTCGGCC GGTGCCATCT TTGCGTTCAT TGGCGCAGCC TGA
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Protein sequence | MTTTTKEFTK ARRASLVAAV FMMATSAIGP GFLTQTATFT ATLGAAFAFG ILASILIDFV VQLNVWRIVS LTKMRAADLA NAAIPGSGYL LTVLVLCGGL VFMLGNIAGA GLGLNALTGL DPKWGGALSA LLAIGIFSSH RAGVAMDRIM MGLGILKICL IVFACFATHP PLGEALRQSV WPDYIDFASI TTIVGGTVGG YITYAGAHRL LDRGTVGVEN LQAVSRAALT GILVTGIARY VLFLAILGVV ASGVVIDVSG KGANPAGQAF QAAAGDIGMM MFGLVLWAAG ISSVIGASYT SMSFITVFSK KITERVRNLA TVVFIVICMA VYIVLGKPPA ALLVFAGGFN GLILPLGLSI FMYVGWARSD LMDGYHYPRW LLVLGILTCL LSWFMAYKSA GAIFAFIGAA
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