Gene PSPTO_5377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5377 
Symbol 
ID1187064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp6109369 
End bp6110601 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content58% 
IMG OID637396694 
Producthypothetical protein 
Protein accessionNP_795104 
Protein GI28872485 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1914] Mn2+ and Fe2+ transporters of the NRAMP family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.31598 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACAACGA CCACAAAAGA GTTCACAAAG GCGCGGCGGG CGTCTTTAGT CGCCGCTGTC 
TTCATGATGG CCACGTCTGC CATCGGGCCT GGCTTCCTGA CCCAGACCGC TACGTTCACG
GCAACATTGG GTGCTGCGTT TGCTTTCGGC ATTCTGGCTT CGATCCTGAT TGACTTCGTC
GTTCAGCTGA ACGTCTGGCG CATAGTGTCG CTGACTAAAA TGCGCGCGGC CGATCTGGCC
AACGCTGCTA TTCCGGGCAG TGGCTACTTG CTGACGGTGT TGGTGCTGTG CGGTGGGCTG
GTGTTCATGC TGGGTAACAT TGCCGGTGCA GGTCTGGGCT TGAATGCGCT GACTGGTCTT
GATCCTAAAT GGGGTGGTGC GTTGAGTGCG CTGCTTGCCA TTGGGATTTT CTCGTCTCAT
CGCGCTGGCG TGGCGATGGA CCGGATCATG ATGGGGCTGG GCATCCTGAA AATATGCCTG
ATCGTGTTCG CATGCTTTGC GACCCATCCT CCGCTGGGCG AAGCCCTGCG TCAGTCGGTA
TGGCCTGACT ACATCGACTT TGCCTCCATC ACCACCATCG TCGGCGGCAC GGTAGGCGGT
TACATCACTT ATGCCGGCGC TCACCGTCTG CTTGATCGCG GCACCGTGGG TGTAGAAAAT
CTTCAGGCGG TATCACGCGC AGCGCTGACC GGTATCCTGG TCACAGGCAT TGCTCGCTAC
GTATTGTTTC TGGCTATTCT GGGTGTGGTG GCAAGCGGAG TGGTTATCGA TGTGTCTGGC
AAGGGCGCAA ACCCTGCTGG TCAGGCATTT CAGGCAGCGG CAGGCGACAT CGGCATGATG
ATGTTCGGCC TGGTGCTGTG GGCGGCGGGT ATCAGCAGTG TAATCGGCGC GTCTTATACG
TCGATGTCCT TTATCACGGT GTTCTCCAAG AAAATCACAG AGCGCGTTCG TAACCTCGCG
ACCGTGGTTT TCATCGTCAT CTGCATGGCT GTCTATATCG TGCTGGGTAA GCCACCGGCA
GCGTTGCTGG TGTTTGCTGG CGGTTTCAAC GGGTTGATCC TGCCGCTGGG CCTGAGCATC
TTCATGTACG TGGGCTGGGC CCGGTCTGAC CTGATGGATG GCTACCACTA TCCACGCTGG
TTGCTGGTGC TGGGTATTCT GACCTGCCTG CTGTCGTGGT TCATGGCCTA CAAGTCGGCC
GGTGCCATCT TTGCGTTCAT TGGCGCAGCC TGA
 
Protein sequence
MTTTTKEFTK ARRASLVAAV FMMATSAIGP GFLTQTATFT ATLGAAFAFG ILASILIDFV 
VQLNVWRIVS LTKMRAADLA NAAIPGSGYL LTVLVLCGGL VFMLGNIAGA GLGLNALTGL
DPKWGGALSA LLAIGIFSSH RAGVAMDRIM MGLGILKICL IVFACFATHP PLGEALRQSV
WPDYIDFASI TTIVGGTVGG YITYAGAHRL LDRGTVGVEN LQAVSRAALT GILVTGIARY
VLFLAILGVV ASGVVIDVSG KGANPAGQAF QAAAGDIGMM MFGLVLWAAG ISSVIGASYT
SMSFITVFSK KITERVRNLA TVVFIVICMA VYIVLGKPPA ALLVFAGGFN GLILPLGLSI
FMYVGWARSD LMDGYHYPRW LLVLGILTCL LSWFMAYKSA GAIFAFIGAA