| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5341 |
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| Symbol | |
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| ID | 1187026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 6070797 |
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| End bp | 6073022 |
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| Gene Length | 2226 bp |
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| Protein Length | 741 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637396660 |
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| Product | hypothetical protein |
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| Protein accession | NP_795072 |
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| Protein GI | 28872453 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCGT TCGGCAAAAT CCTGGGGCTG TTTATTCTCG GGTTGTTGCT GATCATCGTG
GCTCTGGGCT TCGCCCTGAC CCACCTGTTT GATCCCAACG ACTACAAAGA CGAGATTCGA
CAGCTGGCAC GCGACAAGGC AAACGTCGAG CTGACGCTTG ACGGCGATAT CGGCTGGAGC
CTGTTCCCTT GGCTCGGCCT GGAATTGCAC GAGGCCCATG TCGCCACCCT GACCGCACCC
GATCAGCCGT TTGCCGATGT GCAGATGCTT GGCCTGTCCG TTCGTGTTCT GCCACTGCTG
CGCCGCCAGG TACAGATGAG CGACATCCGT GTCGAAGGTC TGAACCTGAC GCTGCACCGC
GATGAAAATG GCCATGGCAA CTGGGAAGAC ATCGGCAAGC CTGCTGTCGC AACCACCGGC
ACACCCGGCG AAGCGACCCC AGCGCCAGCG CCGGACGCGG CGAAACCTGA TCGCCCTTCC
CAGCCCATCC GGCTGGACAT CGACAGCCTG ACCGTCAATA ACGCTCGCGT TGACTACAGC
GACGCCCGAA AGGGCCGAAC CTTCACGGCC GAGAGTATCC AGTTGAGCAC CGGGCCGATT
CGTGAAGCGT CCGATATCCC GATCAAACTG ACAGCGTTCC TGAGCACCAA CCAGCCGGTT
GTACGCACCA AGACCGAGCT GGTCGGCCAG TTGCGCATGG ACCGCGTGCT CAAGCGCTAT
CAGTTCGAAG ACATGCGCCT GTCCGGCGAA GTCGCAGGCG AGCCGCTGCA GGGCAAATTG
GTAACGTTCT CGGCCCAGGG CCAACTGCTG GTGGACCTCA CCGCGAACAT CGCCGAATGG
AACAGCCTCA AAATCTCGGC CAACCAATTG CGCGCGCTGG GCGAATTGCG TGCTCGCGAC
CTGGACAAAA CCCCGCAGAT CAGCGGCGGC CTCTCCATAG CCTCGCTTGA TCTGCGCGCA
TTCTTCGAAA ACATCGGTCA GCCGCTGCCA GCAATGGCAG AAGGTGCGCT GAGCAAGGTT
GAAATGGTCA CGCGCCTCAG CGGCACGCCC ACCAGCCTTG CGTTGGAAAA CCTCAACCTG
AAAGTTGATG ACAGCACCTT CACCGGGCGC ATTGCCGTAG ACGACTTCGC CAGACAGGCG
CTGCGCGTCC AGCTCAAGGC TGACACCTTC GACGCCGACC GCTATCGCCC GGCTGAAAGC
GAAGAAAGCA AAGGCGCCAA GGCTGCGCGC AAATCCGAAG TGCAATCGGG CGAAGCCGCC
GCCGTTGCAG GCGACTCGCC GTTGCCCGAG CAACCGACCA AGGCGGCCTG GAGCAGCGCA
AAACTGCTGC CACTGGAGCG TCTGCGCACG CTGGATGTCG CGGCAGACCT GAGTTTCGGC
AAGCTGACCC TGAACAAGCT GCCCATCGGC AACGCTGCGC TCAGAACACA GGCCAGCGGT
GGCGTGATCA AGCTCGACAC CTTGAGTGGC GATCTCTACA ACGGCAACTT CGAGGTCAAG
GGTGACCTGG ATGCACGTCC GGATGTGCCG GTTGCGAGTG TACAAACGCG TGTTGCCAAG
GTGCCGATCG AGCGCGTTCT CGAAAGCCAG GGCCAGACAC CTCCCGTACG CGGCCTGCTG
ACCCTCGACA GCAGCATGAC CGGCAAGGGC AACAGCGAAA AAGCCCTGAT CGACAGCCTC
AATGGCACCG CCAGCTTTGC ACTCAACAAC GGCGTGCTGG TCAATGCCAA CCTGGAGCAG
CAACTGTGCA GAGGCATTTC GATCCTCAAC CGTAAAACGC TCAGCGGCGA GCCGCGCGCC
AAGGACACAC CGTTCCAGCA ACTCAACGGC ACGCTGGTCA TGCGCAACGG CGTCGCCAGC
AACCCCGACC TGAAAATGCG CATTCCGGGC ATGACCGTCA ACGGCAACGG TGACGTAGAC
CTGCGCGTAC TGGGCATGAA CTACCGCGTC GGCATCATCG TCGAAGGCGA CAAGAGCGAC
ATGCCGGACC CGGCCTGCGA GATCAACCCG CGCTTTGTCG GCATCGAGTG GCCGGTGCAG
TGCCGTGGCC CCCTGGAACT GGGAGCCAAG GCCTGCCGTC TGGACAAGGA AGGCGTTGGC
CAGATCGCCG CGAAGCTGGC CGGCGACCGG ATCAGCGAGA AGCTCGAGGG CAAGCTGGAC
GAGAAACTGG GCGACAAGGT CAGCCCTGAA CTCAAGGACG CGCTCAAGGG ATTGTTCAAG
CGCTGA
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| Protein sequence | MKAFGKILGL FILGLLLIIV ALGFALTHLF DPNDYKDEIR QLARDKANVE LTLDGDIGWS
LFPWLGLELH EAHVATLTAP DQPFADVQML GLSVRVLPLL RRQVQMSDIR VEGLNLTLHR
DENGHGNWED IGKPAVATTG TPGEATPAPA PDAAKPDRPS QPIRLDIDSL TVNNARVDYS
DARKGRTFTA ESIQLSTGPI REASDIPIKL TAFLSTNQPV VRTKTELVGQ LRMDRVLKRY
QFEDMRLSGE VAGEPLQGKL VTFSAQGQLL VDLTANIAEW NSLKISANQL RALGELRARD
LDKTPQISGG LSIASLDLRA FFENIGQPLP AMAEGALSKV EMVTRLSGTP TSLALENLNL
KVDDSTFTGR IAVDDFARQA LRVQLKADTF DADRYRPAES EESKGAKAAR KSEVQSGEAA
AVAGDSPLPE QPTKAAWSSA KLLPLERLRT LDVAADLSFG KLTLNKLPIG NAALRTQASG
GVIKLDTLSG DLYNGNFEVK GDLDARPDVP VASVQTRVAK VPIERVLESQ GQTPPVRGLL
TLDSSMTGKG NSEKALIDSL NGTASFALNN GVLVNANLEQ QLCRGISILN RKTLSGEPRA
KDTPFQQLNG TLVMRNGVAS NPDLKMRIPG MTVNGNGDVD LRVLGMNYRV GIIVEGDKSD
MPDPACEINP RFVGIEWPVQ CRGPLELGAK ACRLDKEGVG QIAAKLAGDR ISEKLEGKLD
EKLGDKVSPE LKDALKGLFK R
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