Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_5330 |
Symbol | |
ID | 1187015 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 6058453 |
End bp | 6059235 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637396649 |
Product | hypothetical protein |
Protein accession | NP_795061 |
Protein GI | 28872442 |
COG category | [S] Function unknown |
COG ID | [COG2861] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGCTTTC TCGGCTCGCT TCTGTTGGCA CTCTCGATCA CTGGCGCTGC GCATGCAGCG CCAGTCGATC ATGCTGAAAA AACCTCGAAA GCCTACTTCA CCCTGATCAT CGACGATCTG GGCCAGAACC CGGTGCGCGA CAGCCGTACT CTGGCGCTCC CAGGCCCGGT CACGCTGGCG ATCATGCCCG ACACCCCGCA CGCCACCGAG TTTGCCCGCG AGGCCCATCG CGCCGGTAAA ACGGTGATTC TGCACATGCC GATGGACCCC GCGACCGGCC CTTACGCCTG GCACCCCGAG CTGCCTCTGC CGGAACTGGA AAGTCGTCTG AATGCAGCGC TGTTGAAAGT GCCGTATGCC GCCGGTATCA ATAACCACAT GGGCAGCCGC ATGACCGCCG AGCCGGTAGC CATGACCTGG CTAATGGCCG AACTGCAGCG ACGTCATCTG TTTTTCGTCG ACAGCCGCAC CAGCGCAAAA ACCGTGGCCG CCGCCGAGGC GCAGCGCATC GGTCTGGCCA GCGTTTCGCG CGATGTGTTC CTGGACGACG AACGCACGGC CGAAGCCATC ACCCGCCAAT TGCAGACTGC AATCAAACTG GCCCAAAAGC ACGGTTCAGC GGTGGTTATC GGTCACCCCT ACCCGGTCAC GCTGGACGTG CTGGAGCGCG AGCTGCCCAA GCTCAAGGCT CAGGGCGTCG AATGGATCGA CCTGCGCAGC ATGATCAGCG AACGCGGCAA TCAGGCGAGT GCGGCGCATG GCAAGAATGG ACTTTACCGC TGA
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Protein sequence | MRFLGSLLLA LSITGAAHAA PVDHAEKTSK AYFTLIIDDL GQNPVRDSRT LALPGPVTLA IMPDTPHATE FAREAHRAGK TVILHMPMDP ATGPYAWHPE LPLPELESRL NAALLKVPYA AGINNHMGSR MTAEPVAMTW LMAELQRRHL FFVDSRTSAK TVAAAEAQRI GLASVSRDVF LDDERTAEAI TRQLQTAIKL AQKHGSAVVI GHPYPVTLDV LERELPKLKA QGVEWIDLRS MISERGNQAS AAHGKNGLYR
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