Gene PSPTO_5319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5319 
SymboltauA 
ID1187004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp6048768 
End bp6049745 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content61% 
IMG OID637396638 
Producttaurine ABC transporter, periplasmic taurine-binding protein 
Protein accessionNP_795050 
Protein GI28872431 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4521] ABC-type taurine transport system, periplasmic component 
TIGRFAM ID[TIGR01729] taurine ABC transporter, periplasmic binding protein 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTGC ATTTTTCCCT GCGCCTGCTG ACAGCGCTGT CGTTGACTGG CGCAACCTTT 
CTCGCACAAG CAGCCGATTT TACGGTTGCC TACCAGACCA CTGTCGATCC AGCCAAGGTG 
GCGCAGGCCG ACAATGCCTA CGAAAAAGCC ACTGACTCGA AAATCGCCTG GCGCAAGTTC 
GACAACGGGG CCGACGTCAT CACTGCCATC GCTTCGAGCG ACGTACAGAT CGGGTATCTC 
GGCTCAAGCC CTTTCACTGC GGCCGCTACG CGCAAACTGC CGGTCGAGAC CTTCCTGATC 
GCCACTCAGA TCGGCGCTGC CGAGGCACTG GTTGCGCGCA ATGGCTCGGG AATCAATTCG 
CCTCAGGACC TGATCGGCAA GAAGATTGCC GTGCCGTTCG TTTCCACCGG CCACTACAGC 
CTGCTCGCGG CACTCAAGCA CTGGAACATC GACCCGGCCA AGGTCACGAT TCTGAACCTC 
GCGCCGCCAG CCATTGCCGC CGCGTGGAAA CGCGGTGACA TCGACGCGAC CTACGTCTGG 
GACCCGGCGC TGGGTGTAGC CAAGGAAACC GGCAAGGTGC TGATCACTTC CGGCGAACTG 
GCCAAGGTTG GCGCGCCGAC GTTCGACGCC TGGATCGTGC GCAAGGACTT CGCCAGCAAA 
CACCCGGAAG TCGTCAAAGC GTTCGCCAAA GTGACGCTGG ATGCCTACGC CCAGTATCGC 
CAGGACCCTG CGGCGTGGAT CGCCAACCCG GCGAACGTCG ACAAGTTGAC CCGGCTTTCC 
GGCGCCAAGG CGTCTGACGT ACCGGAACTG CTGCAAGGCA ATGTCTATCC GCTGGCCACC 
GAGCAGAGCT CACTGCTGGG CACACCGACC ATCGAAGCGG TAGCCAAAAC TGCGGCGTTC 
CTTAAAGAAC AAGGCAAGGT CGACGCGGTG CTGCCTGATT ACTCGCCGTA CGTCAGCAAC 
GCATTCATCC CGCAATAA
 
Protein sequence
MKLHFSLRLL TALSLTGATF LAQAADFTVA YQTTVDPAKV AQADNAYEKA TDSKIAWRKF 
DNGADVITAI ASSDVQIGYL GSSPFTAAAT RKLPVETFLI ATQIGAAEAL VARNGSGINS 
PQDLIGKKIA VPFVSTGHYS LLAALKHWNI DPAKVTILNL APPAIAAAWK RGDIDATYVW 
DPALGVAKET GKVLITSGEL AKVGAPTFDA WIVRKDFASK HPEVVKAFAK VTLDAYAQYR 
QDPAAWIANP ANVDKLTRLS GAKASDVPEL LQGNVYPLAT EQSSLLGTPT IEAVAKTAAF 
LKEQGKVDAV LPDYSPYVSN AFIPQ