Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_5299 |
Symbol | |
ID | 1186984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 6023930 |
End bp | 6025000 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637396618 |
Product | hypothetical protein |
Protein accession | NP_795030 |
Protein GI | 28872411 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2267] Lysophospholipase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.19517 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCTTT GCGGCAAACT GGCGAATATC ACGACAGTCG ATTATGGCGG CATAGCTTGC CATGCCGGAG TAGACAGAAG AATATCGTTA CACAACTTTA CGATTTCCTT GCCGGAATCT GGAAACCCCA TGTCCGCCAC GTTCGACCCC GATAATCTGC GAGCCAGCCT GCTGGCGCTG AACGTTATTG ACCCCCTTTC TCTGGACGGT CAGGCGTATC AGCGCTTCTA CGGTCTTGCA GGCCTTGGCG GTGAAAATGT GGTGCGCAGC TGGCTTGGTC GCCTTGATGT TGACGGCTAT GAGATTGTCG GGCAAGTGTG GCTGCCCGAA AGCCCGGTCG CGACGCTGTT TCTGTTTCAT GGTTTCTACG ACCACATGGG CCTGTACCGG CATGTCATCG AATGGGCGCT GACCCAGGGT TTTGCAGTGA TCTCCTGCGA CCTGCCAGGG CATGGATTAT CCAGCGGCAG CCGTGCCAGC ATCAACGATT TCGCCGAATA TCAGGTGGTA TTGCAGCGCC TGCTGCTTGA AGCCGGCTCC CTGGGTCTGC CGCACCCCTG GCATCTGTGC GGGCAAAGCA CGGGTGGCGC GATTGTGATC GATCACTTGC TGCATCAGGG CGCAGAGTCT CCGGCGCAAG GTGAAGTCAT TCTGCTGGCA CCCTTGGTCA GGCCGCGTGC ATGGGGCTGG TCGCGTTTCA GCTATCGCCT GCTCAAGCCC TTCGTGAGCG GCATTGCCCG GCGCTTCACC GAGAACTCCA ACGCGCCGGC GTTCCTGCCT TTTCTGCTGG CCGACCCGTT GCAGCCGCGT CGCCTGCCGA CCGCCTGGGT CGGCGCGCTG GCGCAATGGA TCGTGCGCGT CGAAAGTGCT CCTCGCAGCC TGCGCAGCCC GATCATCATT CAAGGCGACG CAGACATGAC GGTCGATTGG TCGCACAACC TTGCGGTCCT GAAAGACAAG TTCAGCCAGC CGCACATTCT CATGCTGGGG CACGCCCGGC ATCATCTGGC CAACGAAACG CCGGAATTGC GGGCCAGGTA CTTTGATTTC GTGAAAGGGC GGCTGGGCTA G
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Protein sequence | MKLCGKLANI TTVDYGGIAC HAGVDRRISL HNFTISLPES GNPMSATFDP DNLRASLLAL NVIDPLSLDG QAYQRFYGLA GLGGENVVRS WLGRLDVDGY EIVGQVWLPE SPVATLFLFH GFYDHMGLYR HVIEWALTQG FAVISCDLPG HGLSSGSRAS INDFAEYQVV LQRLLLEAGS LGLPHPWHLC GQSTGGAIVI DHLLHQGAES PAQGEVILLA PLVRPRAWGW SRFSYRLLKP FVSGIARRFT ENSNAPAFLP FLLADPLQPR RLPTAWVGAL AQWIVRVESA PRSLRSPIII QGDADMTVDW SHNLAVLKDK FSQPHILMLG HARHHLANET PELRARYFDF VKGRLG
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