Gene PSPTO_5252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5252 
Symbol 
ID1186937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp5972740 
End bp5973402 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content59% 
IMG OID637396571 
ProductDedA family protein 
Protein accessionNP_794983 
Protein GI28872364 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCCAGA ATTTCTTGAA CGAATTCGGC TACTTTGCCC TTTTCCTCGG CACCTTCTTT 
GAAGGCGAGA CCATTCTGGT TCTTGCCGGA TTTCTGGCGT TCCGCGGATA CATGGACCTC 
AATATCGTCA TCCTCGTCGC GTTCTGTGGC AGTTATGCGG GTGACCAGTT GTGGTATTTC 
ATGGGTCGCA AACACGGCCG CAAGCTCCTG GCGCGCAAGC CTCGCTGGCA ACTCATGGGC 
GACAAGGCAC TCAGGCTGGT GCGCAAACAC CCCGACATCT GGGTGCTGAG CTTCCGCTTC 
GTGTACGGCC TGCGCACTGT CATGCCCGTG GCCATCGGCC TGTCCGGCTA CCCACCCGCA 
CGCTATCTGG TGCTGAACGG TATCGGCGCG GCGGTCTGGG CGGCGGCGCT GGGCTCGGCC 
GCTTACCACT TTGGCGCGAT TCTCGAAGGC TTGCTGGGCA ACGTGAAGAA ATACGAGCTC 
TGGGTACTGG GCGCGCTGAT ACTGCTTGGC CTTTGCCTGT GGATCCGCAG ACGCTTCAAG 
AACGCTCGCA TTGCTCGTGA AGCGCGCGCA GAAAAGGACC GTTTCTGTGC ATCGGCAGCC 
GCTTCCGACC TGGATATGCC CGCAGCAGTA CCCGTCGATC TGACCAAAAA AACCGACGAG 
TAA
 
Protein sequence
MLQNFLNEFG YFALFLGTFF EGETILVLAG FLAFRGYMDL NIVILVAFCG SYAGDQLWYF 
MGRKHGRKLL ARKPRWQLMG DKALRLVRKH PDIWVLSFRF VYGLRTVMPV AIGLSGYPPA 
RYLVLNGIGA AVWAAALGSA AYHFGAILEG LLGNVKKYEL WVLGALILLG LCLWIRRRFK 
NARIAREARA EKDRFCASAA ASDLDMPAAV PVDLTKKTDE