Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_5229 |
Symbol | |
ID | 1186914 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 5950332 |
End bp | 5950781 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637396548 |
Product | hypothetical protein |
Protein accession | NP_794960 |
Protein GI | 28872341 |
COG category | [S] Function unknown |
COG ID | [COG2947] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCTATT GGCTGATGAA GTCAGAGCCT GACGAATTCT CGATCAGCGA CCTGCAACGA CTGGGCAAAG CGCGCTGGGA CGGCGTGCGC AACTATCAGG CGCGTAATTT TCTGAGAACC ATGGCAGAGG GCGACGAATT CTTTTTCTAC CATTCCAGTT GCCCGGAACC GGGAATTGCC GGTATCGGCA AAATCGTCAA AACGGCTTAC CCAGACCCCA CCGCACTGGA CCCCGACAGC CATTATCACG ATGCCAAGGC CACTACCGAG AAAAACCCGT GGAGTGCCCT CGATATCGGG TTTGTGGATA TCTTCAAGAA CGTACTGGGG CTGGGTTATC TGAAACAGCA AAGCCAGCTT GAGCAACTGC CTCTGGTGCA AAAAGGCAGC CGACTGTCAG TCATGCCAGT TACCGCCGAA CAATGGGCGG CGATCCTGGC ACTGCGCTGA
|
Protein sequence | MAYWLMKSEP DEFSISDLQR LGKARWDGVR NYQARNFLRT MAEGDEFFFY HSSCPEPGIA GIGKIVKTAY PDPTALDPDS HYHDAKATTE KNPWSALDIG FVDIFKNVLG LGYLKQQSQL EQLPLVQKGS RLSVMPVTAE QWAAILALR
|
| |