Gene PSPTO_5229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5229 
Symbol 
ID1186914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp5950332 
End bp5950781 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content55% 
IMG OID637396548 
Producthypothetical protein 
Protein accessionNP_794960 
Protein GI28872341 
COG category[S] Function unknown 
COG ID[COG2947] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCTATT GGCTGATGAA GTCAGAGCCT GACGAATTCT CGATCAGCGA CCTGCAACGA 
CTGGGCAAAG CGCGCTGGGA CGGCGTGCGC AACTATCAGG CGCGTAATTT TCTGAGAACC
ATGGCAGAGG GCGACGAATT CTTTTTCTAC CATTCCAGTT GCCCGGAACC GGGAATTGCC
GGTATCGGCA AAATCGTCAA AACGGCTTAC CCAGACCCCA CCGCACTGGA CCCCGACAGC
CATTATCACG ATGCCAAGGC CACTACCGAG AAAAACCCGT GGAGTGCCCT CGATATCGGG
TTTGTGGATA TCTTCAAGAA CGTACTGGGG CTGGGTTATC TGAAACAGCA AAGCCAGCTT
GAGCAACTGC CTCTGGTGCA AAAAGGCAGC CGACTGTCAG TCATGCCAGT TACCGCCGAA
CAATGGGCGG CGATCCTGGC ACTGCGCTGA
 
Protein sequence
MAYWLMKSEP DEFSISDLQR LGKARWDGVR NYQARNFLRT MAEGDEFFFY HSSCPEPGIA 
GIGKIVKTAY PDPTALDPDS HYHDAKATTE KNPWSALDIG FVDIFKNVLG LGYLKQQSQL
EQLPLVQKGS RLSVMPVTAE QWAAILALR