Gene PSPTO_5226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5226 
Symbol 
ID1186911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp5948695 
End bp5949024 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content61% 
IMG OID637396545 
Producthypothetical protein 
Protein accessionNP_794957 
Protein GI28872338 
COG category[S] Function unknown 
COG ID[COG3027] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAATG GCAACAGCGT CACCGTTCAG ATCCTCGACA AGGAATACTC GATCATCTGC 
CCTCAGGAAG AGCGCACCAA CCTGGTCAGC GCCGCCCGTT ACCTGGACGG CAAGATGCGT
GAAATCCGCA GCAGCGGCAA AGTCATCGGT GCCGATCGCA TCGCCGTCAT GGCCGCCCTC
AACATCACTC ACGACTTGCT GCACAAGGAG CATCTGCCTG ACGTGCAGAG CAGCGGCTCG
ACTCGCGAAC AGGTCCGCGA TCTGCTCGAC AAGGTCGATC TGGTGCTGGC CACAGACACG
CCCGGCACAC CGGACTCAAC TCGGGGCTGA
 
Protein sequence
MSNGNSVTVQ ILDKEYSIIC PQEERTNLVS AARYLDGKMR EIRSSGKVIG ADRIAVMAAL 
NITHDLLHKE HLPDVQSSGS TREQVRDLLD KVDLVLATDT PGTPDSTRG