| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5220 |
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| Symbol | |
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| ID | 1186905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5942813 |
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| End bp | 5943805 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637396539 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | NP_794951 |
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| Protein GI | 28872332 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGAGC CAAGCAGTCT CGCCAGTTGG ACCCGCGCCT TGCGCAAGCA ACTCGATGCG
CTGGGAGTGG ACAGCCATGC GCTGTGCAGG AGCGCGGGTA TCCATATGGA ATCGCTGGAT
GACCCCGGCG CGCAATTTCC GGCCGACGCT ATCGCCAGGC TTTGGCAACT GGCGGTGCAC
GCCAGCCTTG ATCCTGCGCT GGGCTTGCGA GTCTCGCGTT TTGTCAGCCC CACAGCGTTC
CATGCACTGG GCTACACGCT GGTGGCCAGC GGCTCTCTGC GCGAGGTTTT CGAGCGTATC
GTGCGCTATC GGGCAATGGC TGAAGACTCG CTGGAACTGG ACTTCAGAGC GGTCGGCGAG
CGTTACGAGT TTCGCTTCGG CACGCCGAAA TCGTGTCAGC TCCCCGCGCA TGAATTGCTG
GATGCATTCG CGGCCATTTA CGTGCGCACT TGCCGCAGTC GGTTAGGCCG GGGTTACGCG
CCACTGTCCG TGCACCTGCA ACGCCCCGCG CCTGACAATC CGCAGCCTTG GGAAGACCTG
TTTCGTTCGC CAGTGATGTT CTCGGCGCAA GAGAACCTGC TGGAGTTTGG CGGCGATGAT
TTCGACAGCC ACCTGGATGA CGGCCCGATG CAGGTAAACG AGCAAAAAGC CAATGGCGAC
CCGTTGCCTT CGCTGATCTG GGAGCAGCGC GTGCGCTCGG CCATCGAAAC CCTGCTGCCG
GATGGCGAGC CGACCGCCGA AAGCATTGCT GCAGCACTGC ACCTGAGCAC GCGCAGCCTG
CATCGCCATT TGGCGGACGA GGGTTGCTGT TACGACCTGT TACTCAATCA ATGCCGCCAG
AACCTGGCAC TGCTGCACAT GAACGACCCG CAAAGCTCAC TGAGCGAAAT CGCCTACCTG
CTGGGCTTTA GCGACACCGA AAGCCTGAGC CGCGCGTTCA AACGCTGGAC CGGGCTGACA
CCGGGGCAGT ATCGGAGTGC GTTGGGGCGG TGA
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| Protein sequence | MPEPSSLASW TRALRKQLDA LGVDSHALCR SAGIHMESLD DPGAQFPADA IARLWQLAVH
ASLDPALGLR VSRFVSPTAF HALGYTLVAS GSLREVFERI VRYRAMAEDS LELDFRAVGE
RYEFRFGTPK SCQLPAHELL DAFAAIYVRT CRSRLGRGYA PLSVHLQRPA PDNPQPWEDL
FRSPVMFSAQ ENLLEFGGDD FDSHLDDGPM QVNEQKANGD PLPSLIWEQR VRSAIETLLP
DGEPTAESIA AALHLSTRSL HRHLADEGCC YDLLLNQCRQ NLALLHMNDP QSSLSEIAYL
LGFSDTESLS RAFKRWTGLT PGQYRSALGR
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