Gene PSPTO_5219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5219 
Symbol 
ID1186904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp5940898 
End bp5942208 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content62% 
IMG OID637396538 
ProductMFS transporter, phthalate permease family 
Protein accessionNP_794950 
Protein GI28872331 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID[TIGR00893] d-galactonate transporter 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATAA AAGGAATTCG ATGGTGGATG GTGGGGCTGG TCACGGCCGG CCTGGTCGTC 
AACTACCTCG CACGCAACAC GCTGTCCGTT GCAGCGCCGA CGCTCATGAG TGAGCTGAGC
ATTTCCACCG AGCAGTACGC GCACATCGTG GTCGCCTGGC AGTTGTGCTA CGCGATCATG
CAACCGGTGG CGGGCTACAT CATCGACGCA ATAGGCACCA AGATGGGCTT CGCGATTTTC
GCTGTGGCCT GGTCGGGTGC CTGTGCTGCG GCAGCGTTCG CAACTGGCTG GCAGAGCCTG
GCAATCTTCC GTGGCCTGCT CGGGCTGACC GAAGCGGCGG GCCTGCCTGC GGGCGTCAAG
GCGACGACCG AATGGTTTCC AGCCAAAGAG CGCTCGGTCG CCATCGGCTG GTTCAACATC
GGCTCGTCAT TCGGCGCATT GCTCGCGCCA CCGTTGGTGG TCTGGGCGAT TCTGCACAGC
GGCTGGGAAC TGGCGTTTCT GATTGTCGGT GGCCTGGGGA TCGTGTGGAG CGGGCTGTGG
CTGCTGCTCT ACAAGCACCC GCGTGACCAG AAACGTCTGG GCGATGCCGA GCGCGATTAC
ATTCTCAGCG GCCAGGAATC GCGCCTCAAG GATGCACCTG CCCAAAAAGG CAGCTGGAAA
CGCCTGTTCA AGAACCGCAA TTTCTACGCC ATCGCCTCGG CGCGCATTCT GTCCGAGCCC
GCCTGGCAGA CCTTCAACGC GTGGATCCCG CTGTACCTGA TGACCGAACG GCACATGAAC
ATCAAGGAAG TCGCGATGTT CGCCTGGCTG CCGTTCCTGG CGGCCGATAT CGGCTGCGTG
CTGGGCGGCT ATCTCAGCCC GCTGTTTCAC AAGTACTGCA AGGTCTCGCT GTTCACCTCT
CGCAAGATGG TCATGCTGTT CGGCTGTTCA TGCATGATCG GCCCGGCCTG CATCGGGCTG
GTCGAAAGCC CTTACACCGC CATTGCGCTG CTGTGCATTG GTGGCTTTGC GCACCAGACT
CTGTCGGGTG CGCTGTACTC GATCACCTCC GACTCGTTCG GCAAAAACGA AGTGGCCACG
GCCACGGGCA TGGGCGGAAT GTTCGGGTTC ATGGGGGCGG CTGCGTTCAC GATGGTGTTT
GGCGTGCTGG TCACCAAGAT CGGCTACAGC CCGCTGTTCG TGGTACTGGC GATCTTCGAC
GTGGTGGCCG CGATTGTGGT CTGGACCGTG GCCCGCGAGG TGCCGCAAAA CGAAGAGCCC
GTTGCACTTG GCGTCGGTGA GCCGGGCCCT CGTACAGTTC CGGTAACCTG A
 
Protein sequence
MKIKGIRWWM VGLVTAGLVV NYLARNTLSV AAPTLMSELS ISTEQYAHIV VAWQLCYAIM 
QPVAGYIIDA IGTKMGFAIF AVAWSGACAA AAFATGWQSL AIFRGLLGLT EAAGLPAGVK
ATTEWFPAKE RSVAIGWFNI GSSFGALLAP PLVVWAILHS GWELAFLIVG GLGIVWSGLW
LLLYKHPRDQ KRLGDAERDY ILSGQESRLK DAPAQKGSWK RLFKNRNFYA IASARILSEP
AWQTFNAWIP LYLMTERHMN IKEVAMFAWL PFLAADIGCV LGGYLSPLFH KYCKVSLFTS
RKMVMLFGCS CMIGPACIGL VESPYTAIAL LCIGGFAHQT LSGALYSITS DSFGKNEVAT
ATGMGGMFGF MGAAAFTMVF GVLVTKIGYS PLFVVLAIFD VVAAIVVWTV AREVPQNEEP
VALGVGEPGP RTVPVT