| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5198 |
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| Symbol | |
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| ID | 1186883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5916711 |
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| End bp | 5917607 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637396517 |
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| Product | dioxygenase, TauD/TfdA family |
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| Protein accession | NP_794929 |
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| Protein GI | 28872310 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2175] Probable taurine catabolism dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAGCAG CCTCCCTCGT TTCATCGTCC ACTCGCGCCG CCTCGCAATC GTTCGACGTG
CGTCCATTCG CCGGAAAGAT GGGCGCGGAA ATCGTTGGGC TGGATCTGTC CAGGCCGCTG
AATGACGCCG ATTTTGCCCG CGTGCATCGG GCGCACCTGG ATCACCATGT TGTGGTGTTC
CGCGATCAGC AGATCACGCC GCAGCAGCAG ATCGATTTCA GTCGCCGCTT TGGCGTGCTG
CAGATTCACG TGCTCAAGCA GTTCCTGCTG GCCAATCACC CGGAAATCCT GATCGTCTCC
AACATTGTCG AGAACGAGAA GCCGGTAGGT CTGGGCGATG CCGGCAAATA CTGGCACTCG
GACCTGTCTT ATAAAGAACT GCCGAGCCTG GGCTCGATGC TCTACGCCCA GGAGTTGCCG
AGCGAGGGCG GCGATACGCT GTTCGCCGAT ATGCACCAGG CGTGGGACAC CTTGCCGCAA
CACCTGCGTG ATGCAGTTGA AGGGCGCTCA GCGGTTCACA GCTACACCGC GCGTTATTCC
GAAGGCCACA ACGCCGTCAA CTGGCGCCCG ACCCTGACCG CCGAGCAATT GGCTCAGGTG
GTCGAGGTCA GTCACCCGAT CGTGCGCACC CATCCTGAAA ACGGTCGCAA GGCATTGTTT
GTCAGTGAGG GTTTCACCAC CCACATTCTG GGCCTGCCGG AAGACGAAAG CCGGGAGATT
CTCGGCGAGT TGTACGCCCA CAGCGTGCGC CCCGAGCATA TCTATCGCCA TCAGTGGCAA
GCCAACGACA TGGTGTTCTG GGACAACCGA TCCCTGATCC ACCTGGCCGC CGGTTGCCCG
GCCCATCTGC GACGCAAACT GCATCGCACG ACCATTCAAG GCACTGCGCC GTTTTGA
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| Protein sequence | MPAASLVSSS TRAASQSFDV RPFAGKMGAE IVGLDLSRPL NDADFARVHR AHLDHHVVVF
RDQQITPQQQ IDFSRRFGVL QIHVLKQFLL ANHPEILIVS NIVENEKPVG LGDAGKYWHS
DLSYKELPSL GSMLYAQELP SEGGDTLFAD MHQAWDTLPQ HLRDAVEGRS AVHSYTARYS
EGHNAVNWRP TLTAEQLAQV VEVSHPIVRT HPENGRKALF VSEGFTTHIL GLPEDESREI
LGELYAHSVR PEHIYRHQWQ ANDMVFWDNR SLIHLAAGCP AHLRRKLHRT TIQGTAPF
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