Gene PSPTO_5190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5190 
Symbol 
ID1186875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp5906379 
End bp5907002 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content63% 
IMG OID637396509 
Producthypothetical protein 
Protein accessionNP_794921 
Protein GI28872302 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTTG ATCCACAGAC CCTTGCGCAC ATCACGTCCG CCACCCTCGG CAACTACAAC 
CGTGTGGCCG ATGACTTTCG CGAAGGCACC CGCGACCATG ACGTCAGCCA GAACATCGAC 
GCGCTGCTGC GCCATATCGA AGGATCGGCG CCGTGGCAGA TTCTCGATTT CGGCTGCGGC 
CCGGGGCGTG ATCTGAAGAC GTTCACGGCA ATGGGGCACG TTGCGGTCGG GCTTGATGGC 
TCCGAGCGCT TCGCCGAGAT GGCCCGTGCC GAAACCGGTT GCGAAGTCTT CCAGCAGAAC 
TTCCTTGAGC TCGATCTGCC GCAAGGCCGC TTCGATGGCA TTTTCGCCAA TGCGGTGCTG 
TTCCACATCC CCAGGCAGGA GCTGCCACGC GTGCTGCGCG AACTGTATGC CACGCTTAAA 
CCGGGCGGCG TACTGTTCAG CTCCAACCCG CGCGGGCAAA ACCAGGAAGG CTGGCAAGGC 
GAGCGCTACG GCGCGTATCA CGACCTCGAA ACATGGCGCC AATTGCTGAC CGACGCCGGG 
TTTGCCGAAC TGGAACACTA CTACCGCCCC GCCGGGCTGC CGAGGGATCA GCAGCCGTGG 
CTGGCGAGCG TCTGGCGGCG CTAG
 
Protein sequence
MKLDPQTLAH ITSATLGNYN RVADDFREGT RDHDVSQNID ALLRHIEGSA PWQILDFGCG 
PGRDLKTFTA MGHVAVGLDG SERFAEMARA ETGCEVFQQN FLELDLPQGR FDGIFANAVL 
FHIPRQELPR VLRELYATLK PGGVLFSSNP RGQNQEGWQG ERYGAYHDLE TWRQLLTDAG 
FAELEHYYRP AGLPRDQQPW LASVWRR