| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5185 |
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| Symbol | |
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| ID | 1186870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5901103 |
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| End bp | 5902308 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637396504 |
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| Product | acyl-CoA dehydrogenase family protein |
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| Protein accession | NP_794916 |
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| Protein GI | 28872297 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTCA ATCCACAGGC GCGCGACCAC GCAGCGCTGA TTACCAGTGA CGCGCAGGCC
CTGCAAGTCG CTGGCGAACT GGCTTCGCAG TTCAAGACCG GCAGCGCCCA ACGCGACAGT
GAGCGCCGTT TACCCCACGC CGAACTCGAC ATCTACAGCC AGTCCGGCTT GTGGGGCATC
AGCGTGCCGA AAGCCTTTGG TGGCGCGGGC GTTTCAAACG TGACGCTGGC CAAGGTGATC
CAGCTGATTT CCGAAGCCGA TGGCTCGCTC GGCCAGATTC CGCAGAACCA TTTTTACGCC
CTTGAAGTGC TGCGCGTGAA CGGCAGCCCC CAGCAACAGG CGCGGCTGTA TGCCGAGGCG
CTGGCAGGCG TGCGCTTCGG CAACGCGCTG GCTGAGCTGG GGACCAAAAC CGCACACGAC
CGCACCACGC GTCTGACGCG CGATGGCGAC GGTTATCGCA TCAACGGCCG CAAGTTTTAC
GCGACCGGCG CGCTGTACGC GCAACGTATT CCCACGTCGG TGGTTGACGA CGACGGCGTG
CAGCAACTGG TGTTCGTCCC GCATGACAGC GAGGGGTTGA CGGTTATCGA TGACTGGAGC
GGTTTCGGCC AGCGCACCAC CGGCAGCGGC TCGGTGGTCT TCGACAACGT GTACGTCAGC
GCAGCTGAGG TAGTGCCATT CCAGAGCGCC TTCGAGCGGC CAACCACGGT CGGCCCGCTG
GCGCAGATTC TCCATGCAGC CATCGACACC GGCATCGCCC GCGCCGCATT CGAGGACGCG
CTGACCTTCG TTCGTACCCG CACCCGGCCA TGGATTGATT CGGGTATCGA AAAAGCCGTG
GATGACCCGC TGACGCTGCA CAGCTTCGGC AGGCTCGGTA TTCGCCTGCA CGCCGCCGAA
GCCCTGCTGG AACGGGCCGG GGAATTTCTT GATATCGCCC AGGCCGACAG CACTGCCGAG
CACGTCGCCG CTGCCTCGAT CGCAGTGGCA GAAGCCCGCG CCATCAGCAC GGAGATTTCC
CTGGCGGCGG GCAGCACACT GTTCGAACTG GCAGGCAGCC AATCGACCCT GGCCGAACAT
GGCCTGGATC GCCACTGGCG CAACGCTCGC GTGCACACGC TGCACGATCC GGTGCGCTGG
AAGTTTCACG CCATCGGCAA TTACTACCTG AACGACGCAA ACCCGCCATT GCGGGGGACG
ATCTGA
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| Protein sequence | MSFNPQARDH AALITSDAQA LQVAGELASQ FKTGSAQRDS ERRLPHAELD IYSQSGLWGI
SVPKAFGGAG VSNVTLAKVI QLISEADGSL GQIPQNHFYA LEVLRVNGSP QQQARLYAEA
LAGVRFGNAL AELGTKTAHD RTTRLTRDGD GYRINGRKFY ATGALYAQRI PTSVVDDDGV
QQLVFVPHDS EGLTVIDDWS GFGQRTTGSG SVVFDNVYVS AAEVVPFQSA FERPTTVGPL
AQILHAAIDT GIARAAFEDA LTFVRTRTRP WIDSGIEKAV DDPLTLHSFG RLGIRLHAAE
ALLERAGEFL DIAQADSTAE HVAAASIAVA EARAISTEIS LAAGSTLFEL AGSQSTLAEH
GLDRHWRNAR VHTLHDPVRW KFHAIGNYYL NDANPPLRGT I
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