| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5174 |
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| Symbol | nhaA-2 |
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| ID | 1186859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5890278 |
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| End bp | 5891453 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637396493 |
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| Product | sodium-proton antiporter NhaA |
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| Protein accession | NP_794905 |
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| Protein GI | 28872286 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3004] Na+/H+ antiporter |
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| TIGRFAM ID | [TIGR00773] Na+/H+ antiporter NhaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCAAG TCCCAAACCG GGAAACGCCC CGTGGCGTTG CCATTCTTAC CCGTTTTCTC
GCCTCCGAAT CAGCGGGCGG CATCGTGCTG ATGGCCGCAG CGCTGGCCGC ACTGATCGTC
GCCAACTCGC CCTTGTCCGC GGGCTACTTC TCGACGCTGC ACAGCGTCTG GCTGGGGCTG
TCGGTCGAGT TGTGGATCAA CGACGGGCTG ATGGCGATCT TCTTTCTGAT GGTCGGTTTG
GAGATCAAGC GCGAAGTGCT GGCCGGTGGC CTGGCAACCT GGGGGCAACG CGCCCTGCCC
GGCTTTGCAG CCCTTGGCGG CATGCTGGTG CCCGCGCTGA TCTACATCGC GATCAACTGG
GGCAACCCGC AGACCCTGAG CGGCTGGGCG ATCCCGGCGG CCACCGACAT CGCCTTCGCC
CTCGGCGTGC TGTCGCTGCT GGGCAATCGC GTGCCGACCT CGCTAAAAGT CTTCCTCGCC
GCGCTGGCGA TTCTCGATGA CCTGGGGGCT GTGACCATCA TCGCGTTTTT CTACAGCTCC
GGGCTTAATC TGCCGATGCT GGCCGCCGCG TTCGTGACCC TCGCCGTGTT GGTCGCGCTG
AACCGCCTGA ACATCCGTCG TCTGCTGCCG TATTTGCTGC TCGGTGCGCT GCTGTGGTTC
TTCGTCCTGC AGTCGGGCGT GCACGCGACG CTGGCCGGTG TCGCGCTGGC GCTGTGTATC
CCGATGGGCA AGCCCGAGGA AGAAGCACGC TCGCCGCTGC TGTTGCTGGA AGAAAAAATG
CATTACTGGG TCGCGTTTGC CGTGGTACCG ATCTTTGGCT TTGCCAATGC CGGCGTATCG
CTTTCCGGCA TTACCCTGGC AAACCTGATC GACCCGGTGC CGCTGGGCGT TGCATTGGGC
CTGTTTGTGG GCAAGCAGAT CGGCGTGTTT CTCGCCGCAG TGCTGGCCAT CCGCGCAGGG
CTCGCCGTGC TGCCGGAGGG CAGCAACTGG GTGCAGCTGT ACGGCGTGGC GATCCTGTGT
GGCATCGGCT TCACCATGAG CCTGTTCATC GGCAACCTGG CATTCCCCGG CTCGCAGCAC
CTGATCGACG AAGTCAAAGT CGGTGTGCTG ATCGGCTCGG GGCTTGCGGC GGTTGCCGGC
ATAGTGCTGC TGCGCAGCCG TTTCAGCCGG CACTGA
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| Protein sequence | MTQVPNRETP RGVAILTRFL ASESAGGIVL MAAALAALIV ANSPLSAGYF STLHSVWLGL
SVELWINDGL MAIFFLMVGL EIKREVLAGG LATWGQRALP GFAALGGMLV PALIYIAINW
GNPQTLSGWA IPAATDIAFA LGVLSLLGNR VPTSLKVFLA ALAILDDLGA VTIIAFFYSS
GLNLPMLAAA FVTLAVLVAL NRLNIRRLLP YLLLGALLWF FVLQSGVHAT LAGVALALCI
PMGKPEEEAR SPLLLLEEKM HYWVAFAVVP IFGFANAGVS LSGITLANLI DPVPLGVALG
LFVGKQIGVF LAAVLAIRAG LAVLPEGSNW VQLYGVAILC GIGFTMSLFI GNLAFPGSQH
LIDEVKVGVL IGSGLAAVAG IVLLRSRFSR H
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