Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_5173 |
Symbol | |
ID | 1186858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 5889631 |
End bp | 5890251 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637396492 |
Product | hypothetical protein |
Protein accession | NP_794904 |
Protein GI | 28872285 |
COG category | [S] Function unknown |
COG ID | [COG3758] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCAAGA CCCGCCTGCT GCGCGCCGCC GACTACCCAC GCATGCCATG GAAAAACGGC GGCGGCAGCA CCGAAGAAAT CGCACGCGAC GCAGGCCAGG ACCTCGACGG CTTTGGCTGG CGACTGTCGA TTGCCGACAT CGACACCTCA GGCGGCTTCT CGGTATTCGC CGGTTATCAA CGCATCATTA CCGTATTGCA GGGCGCCGGC ATGACCCTGG AGGTGGACGG CGTGGCCAGT CGCCCGCTGC TGCCTTCAGA TCCGTTTGCC TTCAGTGGTG ACAGCGCAGT CAGCTGCACC CTGCTGGACG GTCCGATTCG CGACTTCAAT CTGATCTATG CTGCACACCG TTACACAGCG CGCCTGCACT GGATCGACGT TCGTCATCCC CAGCGTCTGT TCAGTTCGGC CAGCACCTTC GTCCTGTTCA GCATGGCCGA ACAGGTGGCG ATCAGCGTCG ACGGCCAGCC TTGGGAAATT CTCGGCAAAC ACGACTGCGC GCTGGTGGAT AATCCCGGCG GTTTGCTGGA AATCGAACTG CAATCACCAC GCGTCAGCCG TTGCTGCCTC ATCGAGCTCA GTGCCACGGG CCAGTCACCG CTTTCTGGCA CCTCACAATA A
|
Protein sequence | MTKTRLLRAA DYPRMPWKNG GGSTEEIARD AGQDLDGFGW RLSIADIDTS GGFSVFAGYQ RIITVLQGAG MTLEVDGVAS RPLLPSDPFA FSGDSAVSCT LLDGPIRDFN LIYAAHRYTA RLHWIDVRHP QRLFSSASTF VLFSMAEQVA ISVDGQPWEI LGKHDCALVD NPGGLLEIEL QSPRVSRCCL IELSATGQSP LSGTSQ
|
| |