| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5157 |
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| Symbol | tatC |
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| ID | 1186842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5865587 |
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| End bp | 5866387 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637396476 |
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| Product | sec-independent protein translocase TatC |
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| Protein accession | NP_794888 |
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| Protein GI | 28872269 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
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| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCGCTG ATATCCCGGA AAACGATCAG CAAATGCCGC TGATCTCGCA CCTCACCGAG
CTGCGTACAC GTCTGTTGCG CTGTGTCGCG GCAGTGTTTC TGATTTTTGC CGGTCTGTTT
TACTTCACGC AGAAGATCTA CACCCTGGTG TCGGCCCCGC TGCGCGTCTA CCTGCCTGAA
GGCGCAACGA TGATCGCCAC CGACGTGGCC TCGCCGTTCA TCACGCCGTT CAAGCTGACC
ATGATGGTCG CGCTGTTTCT GTCGATGCCG GTCATCCTGC ATCAGATCTG GGGCTTCATC
GCCCCGGGCC TGTACAAGCA TGAAAAGCGT GTGGCCATTC CGTTGCTGGT CTCCAGCATC
ATCCTGTTTT ACGCAGGCAT GGCGTTCGCC TACTTTCTGG TCTTTCCGAT CATCTTCCAC
TTCTTCGCCA GCGTGACGCC GGAAGGCGTG TCGATGATGA CCGACATCGC CAGTTATCTG
GACTTCGTGA TGACGTTGTT CTTCGCCTTC GGCGTGGCCT TCGAGATCCC GGTGGCGGTG
GTGTTGCTGG TCTGGATCGG CATTGTCGAC GTCAAGTACC TGAAAAAGAT TCGTCCGTAC
GTGATCATCG GCTGCTTCGT GGTCGGCATG ATCCTGACCC CGCCGGACAT CTTCTCGCAA
ACGCTGCTGG CTGTGCCGAT GTGGCTGCTG TTCGAGCTGG GCATCCTGTG CAGCTCGATG
ATCAGGAAGC GCGGCGAACA CCCGGACGAT GAAACCGAGG ACGCTGACAA GCAGGATCAG
CCGCCCGCCA CCACACCGTG A
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| Protein sequence | MSADIPENDQ QMPLISHLTE LRTRLLRCVA AVFLIFAGLF YFTQKIYTLV SAPLRVYLPE
GATMIATDVA SPFITPFKLT MMVALFLSMP VILHQIWGFI APGLYKHEKR VAIPLLVSSI
ILFYAGMAFA YFLVFPIIFH FFASVTPEGV SMMTDIASYL DFVMTLFFAF GVAFEIPVAV
VLLVWIGIVD VKYLKKIRPY VIIGCFVVGM ILTPPDIFSQ TLLAVPMWLL FELGILCSSM
IRKRGEHPDD ETEDADKQDQ PPATTP
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