| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5133 |
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| Symbol | |
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| ID | 1186818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5840698 |
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| End bp | 5843142 |
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| Gene Length | 2445 bp |
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| Protein Length | 814 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637396453 |
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| Product | penicillin-binding protein |
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| Protein accession | NP_794865 |
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| Protein GI | 28872246 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0554788 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATACGCC TGCTGAAGTT TTTCTGGTGG TCCCTCGTAG CGGTATTCTG CTCGCTGTTA
CTCGGCCTGA GCGGCGCGTT TCTGTATCTG AGCCCGACCC TGCCCTCTGT CGAAGCGCTG
CGAAGCATTC AACTGCAAAT TCCCCTGCGC GTGTTCAGCA GCGACGGCAA GCTGATTGCC
GAGTTCGGCG AGATGCGCCG GACCCCGATT CGCTTTGCCG AAATCCCGCC CAACTTCATC
AACGCGCTGT TATCGGCCGA AGACGACAAC TTCGCCAACC ACTATGGCGT TGACCCCAGC
AGCCTGATGC GCGCCGCCAC CCAATTGGTG AAGAGCGGTC ATATTCAGTC AGGCGGCAGT
ACCATCACCA TGCAGGTCGC GAAAAACTTT TTCCTGACCA GCGAACGAAG CTTTTCGCGC
AAAACCACAG AGATCCTTCT CGCCTTGCAA ATCGAGCGCC AACTCACCAA AGACGAGATT
CTCGAGCTGT ACGTGAACAA GATTTATCTG GGTAACCGCG CCTACGGCAT CGAGGCGGCG
GCGCAAGTCT ACTATGGCAA ATCGATTCGC GATGTAAGCC TTGCGCAAAT GGCCATGATT
GCCGGTTTGC CCAAGGCGCC GTCACGCTTC AACCCACTCG CCAATGCAAC CCGTGCCAAA
GAGCGTCGCG ACTGGATTCT GGGGCGCATG TTCCGTCTGG GCAAAATCGA CCAGGCTGCG
TATCAGGCAG CGCTCAACGA GCCGCTCAAC GCCAGTTATC ACGTACCGAC ACCGGAAGTG
AACGCGCCGT ACATCGCTGA AATGGCCCGC GCCGAAATGG TCGGCCGTTA TGGCAGCGAG
GCCTATACAG AGGGCTTCCG CGTCACGACC ACGGTGCCGA GCGACCTGCA GGAGCACGCC
AACAAGTCCA TCCAGCAGGG CTTGATCGAC TACGATCAAC GCCACGGCTA TCGCGGGCCT
GAAAGCCGCT TCCCGGGCAT GACCCGCGCT GGCTGGACGC AGGAGCTGAC CAAACAACGC
ACGATCAACG GCCTGGAGCC GGCCATCGTC ACCCAGATCG ACAAGACCGG TCTGCGCGTT
TTGACGCGCA ATGGCGAGAA GGAAGAAACC GTCGATTGGG CCAGCATGAA GTGGGCGCGT
CCTTATCTGA ACACCAACAG CCTGGGCGCC AATCCCAAGC AGCCTGGCGA TGTTGCGAAG
GTGGGTGATC TGGTTCGCCT GCTGCGTCAG GACGATGGCT CGCTGAAATT CAGTCAAATT
CCCGTCGCGC AAAGCGCTCT GGTTTCCCTC GACCCGCAAA ATGGCGCCAT CCGCGCCCTG
GTCGGCGGTT TTGCTTTCGA GCAGAGCAAC TACAACCGGG CCATGCAGGC CAAGCGTCAG
CCGGGCTCCA GTTTCAAGCC ATTCATTTAC AGCGCCGCGC TGGATAACGG CTACACCGCC
TCCAGCCTGG TGAACGACGC GCCGATCGTG TTCGTCGACG AGTATCTGGA CAAGGTATGG
CGTCCGAAAA ATGACACCAA CACCTTCCTC GGCCCGATCC GCCTGCGCGA AGCGCTGTAC
AAGTCGCGCA ACCTGGTTTC TATCCGCCTG CTGCAGGCGC TGGGCGTCGA TAGCACCATC
GACTACATCA CTCGCTTCGG TTTTGCCAAG CAGGATCTGC CACGCAACCT GTCGCTGGCA
CTCGGTACGG CCACACTGAC CCCGATGGAA ATCGCTACCG GCTGGGCGAC CTTTGCCAAC
GGCGGTTACA AGGTCAGCCC TTACCTGATC CAGACCATCG AGAACCGTGA CGGCCAGACG
CTGTTTGTCG CCAATCCGCC TAGCGTTCCG GTCAATGACG TGAATACGGC GCCCAATACG
TCGACCTTTG CCGTGCATGA CAGCCCGAGC GTAGTCGCAA GCCCTCCGGG CTCACCGGCC
CAACCGCAAG CGCCAGCCGT TGCCGAGCGC ATTGTGGATG GGCGCACCAC GTACATTCTG
AACAGCATGC TGCAGGACGT GATCAAGCGC GGCACCGGGC GTCGCGCCTT GTCGATGAAC
CGGCCGGACA TTGCAGGCAA GACCGGTACG ACCAACGATT CCAAGGATGC ATGGTTCTCC
GGCTACAACG CGGATTACGT CACGACGGTG TGGAGCGGTT TCGATCAGCC TGAGAGCCTT
GGCCGTCATG AATTTGGCGG TACGGTCTCG TTGCCGATCT GGATGGACTA CATGAGCGCC
GCGCTCAAGG ACAAACCACC CCATCAGCAG GCCGAACCGT CTGGCATCCT CAGCCTGCGC
GTCGACCCGC TGAGCGGCCG CGCGGCCACA CCGAGCACGC CAAACGCGTT CTTCGAGCTG
TTCAAAAGCG AAGACACACC GCCAAGCGTC AACGAACTGG GCGGCGGTAG CGCACCCGGC
AGCCCGCTGC CAGCAGACGA GTCCGCGCCG ATCGACTTAT TCTGA
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| Protein sequence | MIRLLKFFWW SLVAVFCSLL LGLSGAFLYL SPTLPSVEAL RSIQLQIPLR VFSSDGKLIA
EFGEMRRTPI RFAEIPPNFI NALLSAEDDN FANHYGVDPS SLMRAATQLV KSGHIQSGGS
TITMQVAKNF FLTSERSFSR KTTEILLALQ IERQLTKDEI LELYVNKIYL GNRAYGIEAA
AQVYYGKSIR DVSLAQMAMI AGLPKAPSRF NPLANATRAK ERRDWILGRM FRLGKIDQAA
YQAALNEPLN ASYHVPTPEV NAPYIAEMAR AEMVGRYGSE AYTEGFRVTT TVPSDLQEHA
NKSIQQGLID YDQRHGYRGP ESRFPGMTRA GWTQELTKQR TINGLEPAIV TQIDKTGLRV
LTRNGEKEET VDWASMKWAR PYLNTNSLGA NPKQPGDVAK VGDLVRLLRQ DDGSLKFSQI
PVAQSALVSL DPQNGAIRAL VGGFAFEQSN YNRAMQAKRQ PGSSFKPFIY SAALDNGYTA
SSLVNDAPIV FVDEYLDKVW RPKNDTNTFL GPIRLREALY KSRNLVSIRL LQALGVDSTI
DYITRFGFAK QDLPRNLSLA LGTATLTPME IATGWATFAN GGYKVSPYLI QTIENRDGQT
LFVANPPSVP VNDVNTAPNT STFAVHDSPS VVASPPGSPA QPQAPAVAER IVDGRTTYIL
NSMLQDVIKR GTGRRALSMN RPDIAGKTGT TNDSKDAWFS GYNADYVTTV WSGFDQPESL
GRHEFGGTVS LPIWMDYMSA ALKDKPPHQQ AEPSGILSLR VDPLSGRAAT PSTPNAFFEL
FKSEDTPPSV NELGGGSAPG SPLPADESAP IDLF
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