Gene PSPTO_5126 details

Gene Information

• Locus tag: PSPTO_5126
• Symbol: aroB
• ID: 1186811
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: -
• Start bp: 5833759
• End bp: 5834862
• Gene Length: 1104 bp
• Protein Length: 367 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637396446
• Product: 3-dehydroquinate synthase
• Protein accession: NP_794858
• Protein GI: 28872239
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0337] 3-dehydroquinate synthetase
• TIGRFAM ID: [TIGR01357] 3-dehydroquinate synthase

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGACAC TTAAGGTCGA GCTGGGCGAG CGCAGCTACC CGATCCATAT AGGCGAAGGC 
CTGCTGGATC AGCCAGAGCT CCTTGCCCCG CACATTGTCG GGCGTCAGGT GGCCATCGTC 
TCCAACACGA CGGTCGCGCC GCTGTATCTG GAGCGCCTGA CTCAGACGCT GGCTGGTTAC 
AATGTCCTGC CGATTGTTCT GCCCGATGGC GAGGCGTTCA AGAACTGGGA AACCCTGCAG 
ACCATTTTCG ATGGCCTGCT CACTGCCCGT CACGACCGTC GTACCACGGT CATTGCGCTG 
GGTGGCGGAG TGATTGGCGA CATGGCCGGT TTCGCTGCGG CGTGTTATCA GCGCGGCGTG 
AATTTCATTC AGATCCCGAC CACGCTGTTG TCTCAGGTGG ACTCCTCGGT CGGCGGCAAG 
ACCGGCATCA ACCATCCGCT GGGCAAGAAC ATGGTCGGTG CGTTCTATCA GCCAAGCGTC 
GTGCTGATCG ACACCACCTC GCTCAATACC CTGCCTGAGC GTGAGTTGTC CGCCGGGCTG 
GCCGAAGTCA TCAAGTACGG TCTGATCTGC GATGAGCCGT TTCTGACCTG GCTCGAAGAA 
CACGTCGACG CCCTGCGCGG GCTTGATCAG GCCGCGCTGA CCGTGGCCAT TGAACGCTCC 
TGCGCCGCGA AGGCGCTGGT GGTCGGTGCC GATGAGCGTG AGTCCGGTGT GCGCGCCACA 
TTGAACCTGG GGCACACATT CGGCCACGCC ATCGAGACGC ATATGGGCTA TGGTGTCTGG 
CTGCATGGCG AAGCGGTGGC TGCCGGTACG GTCATGGCGC TGGAAATGTC CTCGCGCCTG 
GGCTGGATCA GCACGCAGGA ACGGGATCGC GGCATTCGCC TGTTTCAGCG CGCCGGGCTG 
CCGGTGGTGC CGCCGCAAGA AATGACGGAA GACAATTTTC TCGAACACAT GGCGATCGAC 
AAGAAAGTCA TCGACGGTCG CCTGCGTCTG GTGCTGTTGC GCCAGATAGG TGAAGCGGTT 
ATCACGGACG ATTATCCACA AGAAGTATTA CAGGCCACCC TGGTTGCGGA CTATCGCGCC 
CTGGTGGATC AGCTTAGAGG TTAA 

 

Protein sequence

MQTLKVELGE RSYPIHIGEG LLDQPELLAP HIVGRQVAIV SNTTVAPLYL ERLTQTLAGY 
NVLPIVLPDG EAFKNWETLQ TIFDGLLTAR HDRRTTVIAL GGGVIGDMAG FAAACYQRGV 
NFIQIPTTLL SQVDSSVGGK TGINHPLGKN MVGAFYQPSV VLIDTTSLNT LPERELSAGL 
AEVIKYGLIC DEPFLTWLEE HVDALRGLDQ AALTVAIERS CAAKALVVGA DERESGVRAT 
LNLGHTFGHA IETHMGYGVW LHGEAVAAGT VMALEMSSRL GWISTQERDR GIRLFQRAGL 
PVVPPQEMTE DNFLEHMAID KKVIDGRLRL VLLRQIGEAV ITDDYPQEVL QATLVADYRA 
LVDQLRG