Gene PSPTO_5089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5089 
Symbol 
ID1186774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp5791486 
End bp5791944 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content63% 
IMG OID637396409 
Producthypothetical protein 
Protein accessionNP_794821 
Protein GI28872202 
COG category[S] Function unknown 
COG ID[COG4104] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCACAATC GGGCAGCCGA TTCTCGCCTA GCCTTCAGGC TTCCAGAACC CACAGGAAGC 
ACTGCCATGT CGTTCATAGT CAGGGAAGGC GATCCAACCA CCACCGGCGG GTTTGTGCTG
AGCGGGTCGT CAAGCGAAGT CATCGACCAG CGCCGCGTTG CCCGCATGGG TGATCCGGTG
TGGTGCCCGA TGTGCACGAG CATCGGTTTC ATTGCTCAGG GCAACCCGAC GTATGTCGAC
GATCTGGTGG CGGTTGCCAC GCAGGGACAT GCAGTGGAGT GCGGCTGCAA ACCCGGCAGC
AACCGCCTGA GCGCCTCGCA GGAACACGTC CACGCCGACA TGGACGCTGC TGTCACCATA
TCCACCGAAC TTGCCTTGGC GGCGCGGCTG CATGCCGAGC ATCTGGCCTG CTCACTCAGA
GACGGCAGCT ACACGCCCGA GGTGCTCCGG CCGCGATGA
 
Protein sequence
MHNRAADSRL AFRLPEPTGS TAMSFIVREG DPTTTGGFVL SGSSSEVIDQ RRVARMGDPV 
WCPMCTSIGF IAQGNPTYVD DLVAVATQGH AVECGCKPGS NRLSASQEHV HADMDAAVTI
STELALAARL HAEHLACSLR DGSYTPEVLR PR