| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5083 |
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| Symbol | mdcE |
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| ID | 1186768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5786806 |
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| End bp | 5787606 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637396403 |
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| Product | malonate decarboxylase, gamma subunit |
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| Protein accession | NP_794815 |
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| Protein GI | 28872196 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03134] malonate decarboxylase, gamma subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCATT CACAACGGGG TTTGAACTGG TTCAACGCGC TGAGCGCAGA CGCGAGCGAA
GTGACCGGTC TACCGGCTTC GCTCAAAGTG GCCGATGGCT TGCTGGGTGA GCAGCCGGTG
CGCTTTGTGG CGGTGATTGC CGACACCAAC AACCGCTTTC CTCGGGCGCG TCAGGGTGAA
GTCGGCTTGT TGGAAGGCTG GGGTCTTGCC AAGGCGGTGG ACGATGCCAT CGAACAGGAT
CGCGAGCGCG CCGAAAAACG TGCGCTGATT GCGATTGTCG ATGTGCCGAG CCAGGCGTAT
GGCCGTCGCG AGGAAGCGCT CGGCATCCAT CAGGCGCTGG CCGGCGCGGT AGACAGTTAC
GCGCGGGCGC GGTTGGCCGG GCATCCGGTG ATTGGCCTGT TGGTTGGCAA GGCGATGTCC
GGCGCATTCC TGGCTCACGG CTATCAAGCC AATCGGTTGA TTGCGTTGCG CGACCCTGGC
GTGATGGTGC ACGCGATGGG CAAGGCCTCG GCCGCCCGCG TTACCCAGCG CAGTGTCGAT
GACCTGGAAA AGCTCGCCGC CAGCATTGCG CCCATGGCTT ACGATATCGA CAGCTACGCC
AGCCTCGGCC TGCTGTGGGA AACCCTGTCG GTCAGCCAGA TCGAACAGCC CGCTGTGGAC
GACCTGACCC AGGTCCGCCA GGTGCTGAGC AGCGCGATCA AGGACGTGCA GGCCAGCGGT
GTCGACCTGA GCAGTCGTCT GGGTGCCAGC AACCGTAAAG CCTCGGCGCA CGTGCGCCAG
TTGTTGCGGG CGCAGTGGTG A
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| Protein sequence | MSHSQRGLNW FNALSADASE VTGLPASLKV ADGLLGEQPV RFVAVIADTN NRFPRARQGE
VGLLEGWGLA KAVDDAIEQD RERAEKRALI AIVDVPSQAY GRREEALGIH QALAGAVDSY
ARARLAGHPV IGLLVGKAMS GAFLAHGYQA NRLIALRDPG VMVHAMGKAS AARVTQRSVD
DLEKLAASIA PMAYDIDSYA SLGLLWETLS VSQIEQPAVD DLTQVRQVLS SAIKDVQASG
VDLSSRLGAS NRKASAHVRQ LLRAQW
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