| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5079 |
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| Symbol | madM |
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| ID | 1186764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5783981 |
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| End bp | 5784745 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637396399 |
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| Product | malonate transporter, MadM subunit |
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| Protein accession | NP_794811 |
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| Protein GI | 28872192 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00808] malonate transporter, MadM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTGGGATC TCATCGAAAA AGGACTGGAA CACAACGGCC TGATCACCGC CTTCGCCTTC
GTCGGCATCA TTATGTGGGT GTCGGTGGTG CTGTCAAAAC GGCTGACGTT TGGCCGCGTG
CACGGCTCGG CCATCGCGAT TGTCATCGGG CTGATCCTGG CCTGGGTCGG CGGCACCTTG
ACCGGTGGCC AGAAGGGGCT GGCCGATATC ACCCTGTTCT CCGGCATCGG CCTGATGGGC
GGGGCGATGC TGCGTGATTT CGCCATCGTG GCGACGGCCT TTGAAGTGCA GGCCACCGAA
GCCCGCAAGG CCGGGCTGAT CGGTGTGATC GCCTTGCTGT TGGGCACGAT TCTACCGTTT
ATCGTGGGTG CGAGCATTGC CTGGCTGTTT GGCTATCGCG ATGCAATCAG CATGACCACC
ATCGGCGCAG GCGCGGTGAC CTATATTGTT GGCCCGGTGA CGGGTGCTGC CTTGGGCGCG
ACCTCTGACG TCATGGCGCT GTCGATTGCC ACCGGCCTGA TCAAGGCGAT TCTGGTGATG
GTCGGCACTC CCATGGCTGC GCGCTGGATG GGGCTGGACA ACCCGCGCTC GGCGATGGTC
TTCGGCGGTC TGGCCGGCAC CGTCAGCGGC GTGACTGCCG GGCTGGCGGC TACGGATCGG
CGTCTGGTGC CTTATGGCGC GCTGACTGCA ACGTTTCACA CCGGGCTGGG CTGCTTGCTT
GGCCCTTCGG TGTTGTATTT CATCGTGCGC GCTATCGTCG GTTAG
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| Protein sequence | MWDLIEKGLE HNGLITAFAF VGIIMWVSVV LSKRLTFGRV HGSAIAIVIG LILAWVGGTL
TGGQKGLADI TLFSGIGLMG GAMLRDFAIV ATAFEVQATE ARKAGLIGVI ALLLGTILPF
IVGASIAWLF GYRDAISMTT IGAGAVTYIV GPVTGAALGA TSDVMALSIA TGLIKAILVM
VGTPMAARWM GLDNPRSAMV FGGLAGTVSG VTAGLAATDR RLVPYGALTA TFHTGLGCLL
GPSVLYFIVR AIVG
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