Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_5072 |
Symbol | |
ID | 1186757 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 5776971 |
End bp | 5777525 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637396392 |
Product | cytochrome b561, putative |
Protein accession | NP_794804 |
Protein GI | 28872185 |
COG category | [C] Energy production and conversion |
COG ID | [COG3038] Cytochrome B561 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGGAATGC AGCTACGTAA TTCATCCTCT CGCTACGGTC TGGTCAGCAT GGTGCTGCAC TGGGGTGTGG CTGCTGTCGT GTTTGGAATG TTCGCGCTGG GGCTGTGGAT GGTCGGGCTG GATTACTACG ATACGTGGCG CAAGGCCGGC CCTGATCTGC ACAAGAGCAT CGGCATCACC CTGTTTGCGG TCATGTTGAT CCGTGTGGTC TGGCGCTTGC TCAGCCCGCC ACCGCCGCCG TTGACCAGCT ACAGTAAGTT GACGCGCATC GGTGCTGCGT TCGGCCACTT GTTTCTGTAT GTGGCGCTGT TTGCCGTGAT GTTCGCCGGT TATCTGATAT CCACCGCCGA TGGCGTGGGC ATCCCGATAT TCGGCTTGTT CGATGTGCCT GCGCTGGTTT CGGGCCTTCC TGAACAAGCA GAAACGGCTG GCTGGATTCA CCTTTACCTG GCCTGGGTCA TCGTGATTTT TGCGGGGCTC CATGGTCTGG CAGCATTGAA ACACCACTTC ATCGATCGCG ATGTGACCCT CAAGCGTATG CTGGGTCGTC ATTGA
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Protein sequence | MGMQLRNSSS RYGLVSMVLH WGVAAVVFGM FALGLWMVGL DYYDTWRKAG PDLHKSIGIT LFAVMLIRVV WRLLSPPPPP LTSYSKLTRI GAAFGHLFLY VALFAVMFAG YLISTADGVG IPIFGLFDVP ALVSGLPEQA ETAGWIHLYL AWVIVIFAGL HGLAALKHHF IDRDVTLKRM LGRH
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