Gene PSPTO_5072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5072 
Symbol 
ID1186757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp5776971 
End bp5777525 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content57% 
IMG OID637396392 
Productcytochrome b561, putative 
Protein accessionNP_794804 
Protein GI28872185 
COG category[C] Energy production and conversion 
COG ID[COG3038] Cytochrome B561 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGGAATGC AGCTACGTAA TTCATCCTCT CGCTACGGTC TGGTCAGCAT GGTGCTGCAC 
TGGGGTGTGG CTGCTGTCGT GTTTGGAATG TTCGCGCTGG GGCTGTGGAT GGTCGGGCTG
GATTACTACG ATACGTGGCG CAAGGCCGGC CCTGATCTGC ACAAGAGCAT CGGCATCACC
CTGTTTGCGG TCATGTTGAT CCGTGTGGTC TGGCGCTTGC TCAGCCCGCC ACCGCCGCCG
TTGACCAGCT ACAGTAAGTT GACGCGCATC GGTGCTGCGT TCGGCCACTT GTTTCTGTAT
GTGGCGCTGT TTGCCGTGAT GTTCGCCGGT TATCTGATAT CCACCGCCGA TGGCGTGGGC
ATCCCGATAT TCGGCTTGTT CGATGTGCCT GCGCTGGTTT CGGGCCTTCC TGAACAAGCA
GAAACGGCTG GCTGGATTCA CCTTTACCTG GCCTGGGTCA TCGTGATTTT TGCGGGGCTC
CATGGTCTGG CAGCATTGAA ACACCACTTC ATCGATCGCG ATGTGACCCT CAAGCGTATG
CTGGGTCGTC ATTGA
 
Protein sequence
MGMQLRNSSS RYGLVSMVLH WGVAAVVFGM FALGLWMVGL DYYDTWRKAG PDLHKSIGIT 
LFAVMLIRVV WRLLSPPPPP LTSYSKLTRI GAAFGHLFLY VALFAVMFAG YLISTADGVG
IPIFGLFDVP ALVSGLPEQA ETAGWIHLYL AWVIVIFAGL HGLAALKHHF IDRDVTLKRM
LGRH