Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_5063 |
Symbol | |
ID | 1186748 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 5766721 |
End bp | 5768178 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637396383 |
Product | gluconate transporter family protein |
Protein accession | NP_794795 |
Protein GI | 28872176 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism |
COG ID | [COG2610] H+/gluconate symporter and related permeases |
TIGRFAM ID | [TIGR00791] gluconate transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCCGC TCATGTTGAT GGTCGTGGCC GGTGCGGGCA TCGCACTGCT GTTGTTTCTG GTGCTCAAGT ATAAATTTCA GCCGTTCGTT GCGTTGATGC TGGTCAGCAT CATCGTGGCG CTGGTCGCCG GTGTTAAGCC GGCAGATCTG GTGGCAACCA TTGAAGGCGG CATGGGCAAG ACCCTCGGCC ACATCGCGAT CATCATCGCC CTGGGCGCGA TGATCGGACG CATCATCGAG CTGTCGGGCG GGGCCGAAGC ACTGGCCAAG ACGCTGATCA ACCGTTTCGG CAACAGGCGC ACGCCGCTGG CGCTGACCGT TGCCGGCTTC ATGGTGGGTA TTCCGGTGTT CTTCGAGGTC GGCGTGATCA TTCTCATGCC GTTGGCCTAC GGCGTGGCCC GTGCGGCGCG CAAACCGCTG CTGATTTTCG CGCTGCCGAT GTGTGCTGCG TTGCTGGCGG TGCATGCGTT CCTGCCGCCA CACCCTGGCG CCGTTGCTGC GGCCAGCCAG TTGGGCGCGG ACCTGGGTCG TGTGTTGATG CTGGGTATCC CGATTGTCGC GGTGCTGTGC ATGATCGGCT ACTTCGTGGC AGGCCGCATG ACTCGCAAGA CCTACCCGAT GACCGATGAT ATTCGCGCAG AAGTCTACGG CCCGCATGTC ACCAACGAAG ACCTGGAAGC TTGGGCGCGC AACGATTATT CCGGCGCGCG TGAAGCCACC GAAACCAAAA CCCTGGGCGC GGAAGAAAGC GCCAGCAGCC TGGCGAGCAA ACTGCCTCCA GCGCCTGCAC CGGGTTTCGG GCTGATCATT GCGCTGATTC TGCTGCCGAT CGTGCTGATC CTGATGGGCA CGCTGGCCAC CACTTTGCTG CCTGCGACGT CCACGCTGCG TGCAGTGCTG ACGGTTCTCG GCGCGCCTCT GGTGGCGCTA CTGATCGACA CACTGCTGTG CGCCTGGCTG CTGGGTTCGC GTCGTGGCTG GAGCCGCACG CAGGTGTCCG ACGTAATCGG CTCTGCCTTG CCGGGTGTGG CGATGGTTAT CCTGATTGCC GGTGCCGGTG GCGTGTTCGG CAAGGTGCTG GTGGATACCG GTATCGGTGC GGTGGTTTCC GAGGCGTTGC GCAATACCGG TTTGCCGGTG CTGGCGCTGG GCTTTCTGCT GACGCTGTTG CTGCGCGCGG TGCAGGGCTC GACCACCGTT GCGCTGGTGA CCACTGCCGG CATTCTCAGC CCGCTGATCG CCACGCTGGA CCTGAGCGCC AACCACTTGG CTCTGTTGTG TCTGGCGATG GGCGGTGGCG GTCTGGCCAT GTCGCACATC AACGATGCCG GTTACTGGAT GTTCACCAAG CTGGCGGGCC TCAACGTCGC CGACGGCTTG CGCACCTGGA CCGTACTGGT CACGCTGCTC GGCACGCTGG GCTTTGTGAT CACCCTGCTG CTTTGGCCAT TCGTCTGA
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Protein sequence | MTPLMLMVVA GAGIALLLFL VLKYKFQPFV ALMLVSIIVA LVAGVKPADL VATIEGGMGK TLGHIAIIIA LGAMIGRIIE LSGGAEALAK TLINRFGNRR TPLALTVAGF MVGIPVFFEV GVIILMPLAY GVARAARKPL LIFALPMCAA LLAVHAFLPP HPGAVAAASQ LGADLGRVLM LGIPIVAVLC MIGYFVAGRM TRKTYPMTDD IRAEVYGPHV TNEDLEAWAR NDYSGAREAT ETKTLGAEES ASSLASKLPP APAPGFGLII ALILLPIVLI LMGTLATTLL PATSTLRAVL TVLGAPLVAL LIDTLLCAWL LGSRRGWSRT QVSDVIGSAL PGVAMVILIA GAGGVFGKVL VDTGIGAVVS EALRNTGLPV LALGFLLTLL LRAVQGSTTV ALVTTAGILS PLIATLDLSA NHLALLCLAM GGGGLAMSHI NDAGYWMFTK LAGLNVADGL RTWTVLVTLL GTLGFVITLL LWPFV
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